RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 MAST2Q6P0Q8 1798 aa1.06□□□□□ -2.24
SCFD1-217ENST00000555953 RALGAPA2Q2PPJ7 1873 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 KMT2BQ9UMN6 2715 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 TRAV7A0A075B6U4 112 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 A0A1B0GVG6 124 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 ZNF860A6NHJ4 632 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 SMIM23A6NLE4 172 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 A8MUN3 132 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 M0R036 132 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 CREBL2O60519 120 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 NSA2O95478 260 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 PRB1P04280 392 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 MSMBP08118 114 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 LGALS1P09382 135 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 RAB13P51153 203 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 LSM6P62312 80 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 HIST1H4AP62805 103 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 HIST3H3Q16695 136 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 IMPG1Q17R60 797 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 ZNF791Q3KP31 576 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 ACSM3Q53FZ2 586 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 CCDC122Q5T0U0 273 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 LPCAT4Q643R3 524 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 ALKAL1Q6UXT8 129 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 KTN1-AS1Q86SY8 53 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 TBC1D19Q8N5T2 526 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 TMEM86BQ8N661 226 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 OR1M1Q8NGA1 313 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 SLC7A6Q92536 515 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 IMMP2LQ96T52 175 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 RSL24D1Q9UHA3 163 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 ANGPT4Q9Y264 503 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 LSM5Q9Y4Y9 91 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 TIMM9Q9Y5J7 89 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 STRCQ7RTU9 1775 aa1.05□□□□□ -2.24
SCFD1-217ENST00000555953 SCAF11Q99590 1463 aaKnown RBP1.05□□□□□ -2.24
SCFD1-217ENST00000555953 RTTNQ86VV8 2226 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 BRWD1Q9NSI6 2320 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 CUL9Q8IWT3 2517 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 TMEM269A0A1B0GVZ9 245 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 ZNF705FA8MVS1 300 aaPredicted RBP1.04□□□□□ -2.24
SCFD1-217ENST00000555953 INMT-MINDY4F8WBC2 141 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 NAPSAO96009 420 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 SERPINA7P05543 415 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 S100A6P06703 90 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 OR5G3P0C626 314 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 FAM228BP0C875 321 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 HIST1H1EP10412 219 aaKnown RBP1.04□□□□□ -2.24
SCFD1-217ENST00000555953 CCL5P13501 91 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 RPL28P46779 137 aaKnown RBP1.04□□□□□ -2.24
SCFD1-217ENST00000555953 CSN1S1P47710 185 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 OR4D2P58180 307 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 DEFA1P59665 94 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 RAB14P61106 215 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 POLR2GP62487 172 aaKnown RBP eCLIP1.04□□□□□ -2.24
SCFD1-217ENST00000555953 RANP62826 216 aaKnown RBP1.04□□□□□ -2.24
SCFD1-217ENST00000555953 RUNX1Q01196 453 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 FAM201AQ5SY85 155 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 C9orf64Q5T6V5 341 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 DCXRQ7Z4W1 244 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 DGCR14Q96DF8 476 aaKnown RBP1.04□□□□□ -2.24
SCFD1-217ENST00000555953 CNBD2Q96M20 576 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 DOHHQ9BU89 302 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 FAM96AQ9H5X1 160 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 CMTM6Q9NX76 183 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 PKIGQ9Y2B9 76 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 MYH11P35749 1972 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 PLB1Q6P1J6 1458 aa1.04□□□□□ -2.24
SCFD1-217ENST00000555953 MEIKINA0A087WXM9 373 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 TRAV38-1A0A0B4J264 116 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 IGHV1-18A0A0C4DH31 117 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 HMSDA8MTL9 139 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 GOLGA6L19H0YKK7 550 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 H3BT86 120 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 H7C2G1 150 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 LEPROTO15243 131 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 NOS1APO75052 506 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 PGLYRP1O75594 196 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 C1QAP02745 245 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 C1QCP02747 245 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 TCRBP04435 133 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 GPX1P07203 203 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 SERPINA6P08185 405 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 SRP19P09132 144 aaKnown RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 KCNE1P15382 129 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 MSNP26038 577 aaKnown RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 CCR2P41597 374 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 CDKN2CP42773 168 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 RPL30P62888 115 aaKnown RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 IFITM2Q01629 132 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 SLC38A11Q08AI6 406 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 OR2F1Q13607 317 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 KRTAP21-3Q3LHN1 58 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 SYPL2Q5VXT5 272 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 GLT8D1Q68CQ7 371 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 ZNF705AQ6ZN79 300 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 Q6ZRN7 208 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 LRRC28Q86X40 367 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-217ENST00000555953 C10orf126Q8N4M7 172 aa1.03□□□□□ -2.24
SCFD1-217ENST00000555953 OR8B12Q8NGG6 310 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms