RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FOXA2Q9Y261 457 aaPredicted RBP8.8□□□□□ -1
TMEM260-208ENST00000555905 NSG2Q9Y328 171 aa8.8□□□□□ -1
TMEM260-208ENST00000555905 POMT1Q9Y6A1 747 aa8.8□□□□□ -1
TMEM260-208ENST00000555905 MXRA5Q9NR99 2828 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 SONP18583 2426 aaKnown RBP8.79□□□□□ -1
TMEM260-208ENST00000555905 FAM90A26D6RGX4 464 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 ST8SIA3O43173 380 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 FGF16O43320 207 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 PITX3O75364 302 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 SCGB1D2O95969 90 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 IFNA17P01571 189 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 MAS1LP35410 378 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 S100A10P60903 97 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 GNB1P62873 340 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 TREML4Q6UXN2 200 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 ZNF429Q86V71 674 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 TMEM86BQ8N661 226 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 Q8N9W7 124 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 OR4D5Q8NGN0 318 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 ZNF418Q8TF45 676 aaPredicted RBP8.79□□□□□ -1
TMEM260-208ENST00000555905 CLCC1Q96S66 551 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 QTRT1Q9BXR0 403 aaKnown RBP8.79□□□□□ -1
TMEM260-208ENST00000555905 COMMD5Q9GZQ3 224 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 RANGRFQ9HD47 186 aaPredicted RBP8.79□□□□□ -1
TMEM260-208ENST00000555905 TPSG1Q9NRR2 321 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 TNFRSF19Q9NS68 423 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 ZNF257Q9Y2Q1 563 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 OR51B2Q9Y5P1 312 aa8.79□□□□□ -1
TMEM260-208ENST00000555905 WRBO00258 174 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 MED6O75586 246 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 NXPH3O95157 252 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 CNIH1O95406 144 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 MBPP02686 304 aaPredicted RBP8.78□□□□□ -1
TMEM260-208ENST00000555905 PET100P0DJ07 73 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 SPCS3P61009 180 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 HSPE1P61604 102 aaKnown RBP8.78□□□□□ -1
TMEM260-208ENST00000555905 TNFRSF9Q07011 255 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 FGL1Q08830 312 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 PJVKQ0ZLH3 352 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 TNXAQ16473 311 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 LRRC37A5PQ49AS3 106 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 AARDQ4LEZ3 155 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 CXorf66Q5JRM2 361 aaPredicted RBP8.78□□□□□ -1
TMEM260-208ENST00000555905 FAM71E2Q8N5Q1 922 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 C5orf56Q8N8D9 126 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 OR1L8Q8NGR8 309 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 OR2T35Q8NGX2 323 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 OR5B3Q8NH48 314 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 OR52E5Q8NH55 327 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 PPP1R1CQ8WVI7 109 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 ST6GAL2Q96JF0 529 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 HSPB7Q9UBY9 170 aa8.78□□□□□ -1
TMEM260-208ENST00000555905 TEX50A0A1B0GTY4 177 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 CEBPZOSA8MTT3 80 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 FCN1O00602 326 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 CA2P00918 260 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 HLA-DRB1P01911 266 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 RLN2P04090 185 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 FAM157CP0CG43 387 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 PSMB6P28072 239 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 COMPP49747 757 aaPredicted RBP8.77□□□□□ -1.01
TMEM260-208ENST00000555905 ID3Q02535 119 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 IL15RAQ13261 267 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 LCE2CQ5TA81 110 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 MRPL41Q8IXM3 137 aaKnown RBP8.77□□□□□ -1.01
TMEM260-208ENST00000555905 TCTE3Q8IZS6 198 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 WDR89Q96FK6 387 aaPredicted RBP8.77□□□□□ -1.01
TMEM260-208ENST00000555905 JMJD8Q96S16 334 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 NEURL2Q9BR09 285 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 HINT2Q9BX68 163 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 MAGT1Q9H0U3 335 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 ENY2Q9NPA8 101 aa8.77□□□□□ -1.01
TMEM260-208ENST00000555905 LSM5Q9Y4Y9 91 aaKnown RBP8.77□□□□□ -1.01
TMEM260-208ENST00000555905 DNAJC9-AS1A6NH13 148 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 K7EPK0 472 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 SYNGR2O43760 224 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 CHST1O43916 411 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 SSSCA1O60232 199 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 CRLF1O75462 422 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 MPC2O95563 127 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 LY86O95711 162 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 OPN1MWP04001 364 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 OPN1MW2P0DN77 364 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 OPN1MW3P0DN78 364 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 PVALBP20472 110 aaPredicted RBP8.76□□□□□ -1.01
TMEM260-208ENST00000555905 RPL27AP46776 148 aaKnown RBP8.76□□□□□ -1.01
TMEM260-208ENST00000555905 HOXA1P49639 335 aaPredicted RBP8.76□□□□□ -1.01
TMEM260-208ENST00000555905 RAB32Q13637 225 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 FXYD3Q14802 87 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 MRGPRG-AS1Q2M3A8 158 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 PDLIM3Q53GG5 364 aaPredicted RBP8.76□□□□□ -1.01
TMEM260-208ENST00000555905 ZNF562Q6V9R5 426 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 THAP6Q8TBB0 222 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 ABHD5Q8WTS1 349 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 RAB40CQ96S21 281 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 RBKSQ9H477 322 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 PLEKHA3Q9HB20 300 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 TET2Q6N021 2002 aaPredicted RBP8.76□□□□□ -1.01
TMEM260-208ENST00000555905 F8P00451 2351 aa8.76□□□□□ -1.01
TMEM260-208ENST00000555905 ANK3Q12955 4377 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms