RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ZNF816Q0VGE8 651 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 CT45A1Q5HYN5 189 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 OR2B11Q5JQS5 317 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 FAM53AQ6NSI3 398 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 HEPN1Q6WQI6 88 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 H2BFWTQ7Z2G1 175 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 LYG1Q8N1E2 194 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 CT45A3Q8NHU0 189 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 WWC2-AS2Q96NR7 200 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 MAGT1Q9H0U3 335 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 IFI27L2Q9H2X8 130 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 C19orf12Q9NSK7 152 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 LYRM2Q9NU23 88 aaPredicted RBP5.56□□□□□ -1.52
SLIRP-204ENST00000555890 MED9Q9NWA0 146 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 FBXL17Q9UF56 701 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 MIOXQ9UGB7 285 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 CACFD1Q9UGQ2 172 aa5.56□□□□□ -1.52
SLIRP-204ENST00000555890 A0A0G2JRQ6 117 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 hCG_1809904A0A1W2PP81 198 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 A0A1W2PPE2 198 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 A0A1W2PR64 198 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 A0A1W2PRV1 198 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 FAM24AA6NFZ4 105 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 LINC00473A8K010 186 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 CD5LO43866 347 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 RAMP3O60896 148 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 FCGR3BO75015 233 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 S1PR2O95136 353 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 GOSR1O95249 250 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 IGHV2-70P01814 119 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 NMBP08949 121 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 RRASP10301 218 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 G6PCP35575 357 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 TAS2R30P59541 319 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 ERVK-16P61578 105 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 EWSR1Q01844 656 aaKnown RBP eCLIP5.55□□□□□ -1.52
SLIRP-204ENST00000555890 BAXQ07812 192 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF273Q14593 569 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 TMEM155Q4W5P6 130 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 RPL39P5Q59GN2 51 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 PRAMEF5Q5TYX0 476 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 NCR3LG1Q68D85 454 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 RPL7L1Q6DKI1 246 aaKnown RBP5.55□□□□□ -1.52
SLIRP-204ENST00000555890 C11orf71Q6IPW1 123 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 SLC25A48Q6ZT89 311 aaKnown RBP5.55□□□□□ -1.52
SLIRP-204ENST00000555890 TCF23Q7RTU1 214 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 DTX2Q86UW9 622 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 COMMD7Q86VX2 200 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 STX12Q86Y82 276 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 TMEM252Q8N6L7 170 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 C8orf31Q8N9H6 132 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 UBAC2Q8NBM4 344 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF439Q8NDP4 499 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 OR8B3Q8NGG8 313 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 OR4S2Q8NH73 311 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 R3HDM4Q96D70 268 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 C5orf30Q96GV9 206 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 SMIM8Q96KF7 97 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 OR8B2Q96RD0 313 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 AIFM2Q9BRQ8 373 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 SMIM3Q9BZL3 60 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 C11orf1Q9H5F2 150 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 PSENENQ9NZ42 101 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 CTSZQ9UBR2 303 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 AUP1Q9Y679 476 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 WSB1Q9Y6I7 421 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 SESN1Q9Y6P5 492 aa5.55□□□□□ -1.52
SLIRP-204ENST00000555890 SAA2-SAA4A0A096LPE2 208 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 A0A1W2PPE3 182 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 LEUTXA8MZ59 168 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 LYNX1G3V0Z9 82 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 SLC31A2O15432 143 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 PPIHO43447 177 aaKnown RBP5.54□□□□□ -1.52
SLIRP-204ENST00000555890 PROP1O75360 226 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 RBMXL2O75526 392 aaKnown RBP5.54□□□□□ -1.52
SLIRP-204ENST00000555890 DFFBO76075 338 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 SCAF4O95104 1147 aaKnown RBP5.54□□□□□ -1.52
SLIRP-204ENST00000555890 NXPH3O95157 252 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 HRASP01112 189 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 IGHV3-7P01780 117 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 DANCRP0C864 163 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 SAA2P0DJI9 122 aaPredicted RBP5.54□□□□□ -1.52
SLIRP-204ENST00000555890 LYNX1P0DP58 116 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 NQO2P16083 231 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 IL3RAP26951 378 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 ARL3P36405 182 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 GNG10P50151 68 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 SULT1A1P50225 295 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 UBE2KP61086 200 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 BLOC1S1P78537 153 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 NHLH2Q02577 135 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 ZNF266Q14584 549 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 RTL8BQ17RB0 113 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 IZUMO4Q1ZYL8 232 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 Q6ZRM9 215 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 OR1S2Q8NGQ3 325 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 OR4A16Q8NH70 328 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 OR9G1Q8NH87 305 aa5.54□□□□□ -1.52
SLIRP-204ENST00000555890 PCNPQ8WW12 178 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms