RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TMEM11P17152 192 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 RPS16P62249 146 aaKnown RBP7.62□□□□□ -1.19
ACTN1-215ENST00000555616 VMA21Q3ZAQ7 101 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 THOC7Q6I9Y2 204 aaKnown RBP7.62□□□□□ -1.19
ACTN1-215ENST00000555616 GSG1LQ6UXU4 331 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 H2BFWTQ7Z2G1 175 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 LYZL2Q7Z4W2 148 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 Q8N6K4 173 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 C5orf56Q8N8D9 126 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 DMBX1Q8NFW5 382 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 VSTM2AQ8TAG5 236 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 FAM110DQ8TAY7 271 aaPredicted RBP7.62□□□□□ -1.19
ACTN1-215ENST00000555616 LSM10Q969L4 123 aaKnown RBP7.62□□□□□ -1.19
ACTN1-215ENST00000555616 RHOVQ96L33 236 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 HYLS1Q96M11 299 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 SPIN2AQ99865 258 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 CITED2Q99967 270 aaPredicted RBP7.62□□□□□ -1.19
ACTN1-215ENST00000555616 SPIN2BQ9BPZ2 258 aa7.62□□□□□ -1.19
ACTN1-215ENST00000555616 TET2Q6N021 2002 aaPredicted RBP7.61□□□□□ -1.19
ACTN1-215ENST00000555616 C13orf42A0A1B0GVH6 325 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 C5orf51A6NDU8 294 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 SH2D7A6NKC9 451 aaPredicted RBP7.61□□□□□ -1.19
ACTN1-215ENST00000555616 ADAP1O75689 374 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 SPDEFO95238 335 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 IGKV1-39P01597 117 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 IGKV1D-39P04432 117 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 G6PCP35575 357 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 POU2AF1Q16633 256 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 GGNBP1Q5YKI7 109 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 OR8H1Q8NGG4 311 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 OR2T35Q8NGX2 323 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 SEC22AQ96IW7 307 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 EAF1Q96JC9 268 aaPredicted RBP7.61□□□□□ -1.19
ACTN1-215ENST00000555616 PDCD10Q9BUL8 212 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 KIAA1456Q9P272 454 aa7.61□□□□□ -1.19
ACTN1-215ENST00000555616 A0A1B0GU03 582 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 CCSO14618 274 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 KCNAB3O43448 404 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 RBMXL2O75526 392 aaKnown RBP7.6□□□□□ -1.19
ACTN1-215ENST00000555616 SNAPC5O75971 98 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 IGKV1-5P01602 117 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 SLC25A6P12236 298 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 H2BFSP57053 126 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 UBE2KP61086 200 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 CYCSP99999 105 aaKnown RBP7.6□□□□□ -1.19
ACTN1-215ENST00000555616 DEFA6Q01524 100 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 HNF4GQ14541 408 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 MMDQ15546 238 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 IAH1Q2TAA2 248 aaPredicted RBP7.6□□□□□ -1.19
ACTN1-215ENST00000555616 NMSQ5H8A3 153 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 TCTEX1D4Q5JR98 221 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 OR4A47Q6IF82 309 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 SSX9Q7RTT3 188 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 VKORC1L1Q8N0U8 176 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 OR4F17Q8NGA8 305 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 OR5AU1Q8NGC0 362 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 OR4A5Q8NH83 315 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 OR4F4Q96R69 305 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 TMEM140Q9NV12 185 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 BET1LQ9NYM9 111 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 CACFD1Q9UGQ2 172 aa7.6□□□□□ -1.19
ACTN1-215ENST00000555616 CMYA5Q8N3K9 4069 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 NCBP2LA6PVI3 153 aaKnown RBP7.59□□□□□ -1.19
ACTN1-215ENST00000555616 SMLR1H3BR10 107 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 NBR2O15453 112 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 SLC25A17O43808 307 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 SIX6O95475 246 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 SAA1P0DJI8 122 aaPredicted RBP7.59□□□□□ -1.19
ACTN1-215ENST00000555616 NKX2-5P52952 324 aaPredicted RBP7.59□□□□□ -1.19
ACTN1-215ENST00000555616 FGL1Q08830 312 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 SMCO1Q147U7 214 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 PLGLAQ15195 96 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 PSG5Q15238 335 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 NSUN5P1Q3KNT7 163 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 TEX45Q8NA69 505 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 OR4X2Q8NGF9 303 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 OR4A16Q8NH70 328 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 OR1S1Q8NH92 325 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 C2orf50Q96LR7 162 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.59□□□□□ -1.19
ACTN1-215ENST00000555616 COA4Q9NYJ1 87 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 FKBP11Q9NYL4 201 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 METTL1Q9UBP6 276 aaKnown RBP7.59□□□□□ -1.19
ACTN1-215ENST00000555616 CACNG5Q9UF02 275 aa7.59□□□□□ -1.19
ACTN1-215ENST00000555616 A0A0G2JRQ6 117 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 SRRM4A7MD48 611 aaKnown RBP7.58□□□□□ -1.2
ACTN1-215ENST00000555616 G3V3Q6 166 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 RRHO14718 337 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 ACTL6BO94805 426 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 KBTBD11O94819 623 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 IGLV2-23P01705 113 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 IGHG2P01859 326 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 FGF2P09038 288 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 P0C879 139 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 PDLIM3Q53GG5 364 aaPredicted RBP7.58□□□□□ -1.2
ACTN1-215ENST00000555616 C9orf152Q5JTZ5 239 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 KPRPQ5T749 579 aaPredicted RBP7.58□□□□□ -1.2
ACTN1-215ENST00000555616 SAMD5Q5TGI4 173 aa7.58□□□□□ -1.2
ACTN1-215ENST00000555616 C10orf99Q6UWK7 81 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms