RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TSNAXQ99598 290 aaKnown RBP8.18□□□□□ -1.1
NEK9-205ENST00000555405 ZNF355PQ9NSJ1 428 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 TCF19Q9Y242 345 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 MINOS1-NBL1R4GNA1 71 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 LY6LH3BQJ8 138 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 PET100P0DJ07 73 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 RPL12P30050 165 aaKnown RBP8.18□□□□□ -1.1
NEK9-205ENST00000555405 TNFRSF9Q07011 255 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 IL22RA2Q969J5 263 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 LSM10Q969L4 123 aaKnown RBP8.18□□□□□ -1.1
NEK9-205ENST00000555405 UNKLQ9H9P5 680 aaKnown RBP8.18□□□□□ -1.1
NEK9-205ENST00000555405 GAB2Q9UQC2 676 aa8.18□□□□□ -1.1
NEK9-205ENST00000555405 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 SPDEFO95238 335 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 OR13C7P0DN81 318 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 CXCL2P19875 107 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 RPL23AP62750 156 aaKnown RBP8.17□□□□□ -1.1
NEK9-205ENST00000555405 RELBQ01201 579 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 C11orf91Q3C1V1 193 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 LGALSLQ3ZCW2 172 aaPredicted RBP8.17□□□□□ -1.1
NEK9-205ENST00000555405 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 BSCL2Q96G97 398 aaPredicted RBP8.17□□□□□ -1.1
NEK9-205ENST00000555405 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
NEK9-205ENST00000555405 E7EUB6 86 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 UPK2O00526 184 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 RBFOX2O43251 390 aaKnown RBP eCLIP8.17□□□□□ -1.1
NEK9-205ENST00000555405 B3GALNT1O75752 331 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 TMEM50AO95807 157 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 IGHV4-59P01825 116 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 HLA-GP17693 338 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 DHRS7BQ6IAN0 325 aaPredicted RBP8.17□□□□□ -1.1
NEK9-205ENST00000555405 RASL11BQ9BPW5 248 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 POMT1Q9Y6A1 747 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
NEK9-205ENST00000555405 G3V3Q6 166 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 CA2P00918 260 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 GATA3P23771 443 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 LGALS7P47929 136 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 TMEM177Q53S58 311 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 PRSS54Q6PEW0 395 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 RBMS3Q6XE24 437 aaKnown RBP8.16□□□□□ -1.1
NEK9-205ENST00000555405 PPP1R27Q86WC6 154 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 C8orf31Q8N9H6 132 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 OR8H1Q8NGG4 311 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 HIPK2Q9H2X6 1198 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 PLEKHA3Q9HB20 300 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 PARP11Q9NR21 331 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 TBL2Q9Y4P3 447 aaKnown RBP8.16□□□□□ -1.1
NEK9-205ENST00000555405 S4R3C0 116 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 NOTCH3Q9UM47 2321 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 BTBD17A6NE02 478 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 NBR2O15453 112 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 CD1BP29016 333 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 DEFA5Q01523 94 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 ECSCRQ19T08 205 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 MIDNQ504T8 468 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 OR5T1Q8NG75 326 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 SIGLEC9Q9Y336 463 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 DUXBA0A1W2PPF3 345 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 E5RGE8 158 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 RRHO14718 337 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 DEDDO75618 318 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 PRH1P02810 166 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 ZNF137PP52743 207 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 ID3Q02535 119 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 FXYD3Q14802 87 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 OR2C3Q8N628 320 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 VSTM2AQ8TAG5 236 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 SLC25A33Q9BSK2 321 aa8.16□□□□□ -1.1
NEK9-205ENST00000555405 GSX1Q9H4S2 264 aaPredicted RBP8.16□□□□□ -1.1
NEK9-205ENST00000555405 POLR3KQ9Y2Y1 108 aaPredicted RBP8.16□□□□□ -1.1
NEK9-205ENST00000555405 TEX50A0A1B0GTY4 177 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 KANTRA0A1W2PQU2 76 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 CYSRT1A8MQ03 144 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 FBXO24O75426 580 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 DEFA4P12838 97 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 RPL27AP46776 148 aaKnown RBP8.15□□□□□ -1.1
NEK9-205ENST00000555405 HSPE1P61604 102 aaKnown RBP8.15□□□□□ -1.1
NEK9-205ENST00000555405 SRSF2Q01130 221 aaKnown RBP8.15□□□□□ -1.1
NEK9-205ENST00000555405 TMUB2Q71RG4 321 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 LILRB2Q8N423 598 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 SSMEM1Q8WWF3 244 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 CFHR4Q92496 578 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 PRNDQ9UKY0 176 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 OPCMLQ14982 345 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 HSD17B11Q8NBQ5 300 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 OR1L8Q8NGR8 309 aa8.15□□□□□ -1.1
NEK9-205ENST00000555405 ATRQ13535 2644 aa8.15□□□□□ -1.11
NEK9-205ENST00000555405 PIGBOS1A0A0B4J2F0 54 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 LFNGQ8NES3 379 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 TET2Q6N021 2002 aaPredicted RBP8.14□□□□□ -1.11
NEK9-205ENST00000555405 IGSF23A1L1A6 192 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 C15orf61A6NNL5 157 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 MED6O75586 246 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 LY6G6DO95868 133 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 IGLV2-23P01705 113 aa8.14□□□□□ -1.11
NEK9-205ENST00000555405 MLANAQ16655 118 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms