RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ANAPC1Q9H1A4 1944 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 F5H5K5 113 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 KCNK1O00180 336 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 TOX3O15405 576 aaPredicted RBP2.53□□□□□ -2
CKS1BP1-201ENST00000555221 MPZL2O60487 215 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 SCN2BO60939 215 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 ZNF7P17097 686 aaPredicted RBP2.53□□□□□ -2
CKS1BP1-201ENST00000555221 CD151P48509 253 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 WHAMMP3Q1A5X7 153 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 HENMT1Q5T8I9 393 aaKnown RBP2.53□□□□□ -2
CKS1BP1-201ENST00000555221 GLT6D1Q7Z4J2 308 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 OR5D18Q8NGL1 313 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 OR9I1Q8NGQ6 314 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 OR4C6Q8NH72 309 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.53□□□□□ -2
CKS1BP1-201ENST00000555221 TRNT1Q96Q11 434 aaKnown RBP2.53□□□□□ -2
CKS1BP1-201ENST00000555221 POTEKPQ9BYX7 375 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 NDEL1Q9GZM8 345 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 METTL17Q9H7H0 456 aaPredicted RBP2.53□□□□□ -2
CKS1BP1-201ENST00000555221 UCK1Q9HA47 277 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 SNX12Q9UMY4 172 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 LINC00588Q9Y4M8 146 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 SNX10Q9Y5X0 201 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 CACNA1EQ15878 2313 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 RELNP78509 3460 aa2.53□□□□□ -2
CKS1BP1-201ENST00000555221 ZFHX3Q15911 3703 aa2.53□□□□□ -2.01
CKS1BP1-201ENST00000555221 NUMA1Q14980 2115 aa2.53□□□□□ -2.01
CKS1BP1-201ENST00000555221 POLQO75417 2590 aa2.53□□□□□ -2.01
CKS1BP1-201ENST00000555221 DENND4CQ5VZ89 1909 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 GOLGA4Q13439 2230 aaKnown RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 SPAG17Q6Q759 2223 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 SETD2Q9BYW2 2564 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 TMEM213A2RRL7 107 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 TXNDC9O14530 226 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 LECT2O14960 151 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 DENRO43583 198 aaKnown RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 MFSD11O43934 449 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 HLA-DQB2P05538 268 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 FBP1P09467 338 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR12D1P0DN82 309 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 PVALBP20472 110 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 PHBP35232 272 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 COILP38432 576 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 PI4KAP42356 2102 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 MAXP61244 160 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 SKP1P63208 163 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 BASP1P80723 227 aaKnown RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 DR1Q01658 176 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 APOFQ13790 326 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 TMED2Q15363 201 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 NIPAL1Q6NVV3 410 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 CROCCP2Q86T23 111 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 OOSP2Q86WS3 158 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 TRAPPC5Q8IUR0 188 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNF567Q8N184 647 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 TBC1D19Q8N5T2 526 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 DEFB119Q8N690 84 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 LMX1AQ8TE12 382 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR8B2Q96RD0 313 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 KLF6Q99612 283 aaPredicted RBP2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNF251Q9BRH9 671 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 CHST5Q9GZS9 411 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 PCBD2Q9H0N5 130 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 ZNF286AQ9HBT8 521 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 TMEM216Q9P0N5 145 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 ATG2BQ96BY7 2078 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 MYOFQ9NZM1 2061 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
CKS1BP1-201ENST00000555221 PLXNB1O43157 2135 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 TRPM6Q9BX84 2022 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 A0A1W2PNM2 257 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 B4DEV8 164 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 C10orf142B7Z368 130 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 E5RI56 91 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 H3BSA7 217 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 J3QLI3 93 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 SLC25A20O43772 301 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 OGNP20774 298 aaKnown RBP2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 PSMA1P25786 263 aaKnown RBP2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 CRABP1P29762 137 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 GABARAPL2P60520 117 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 NAA20P61599 178 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 CENPWQ5EE01 88 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 SPANXN3Q5MJ09 141 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 PTRHD1Q6GMV3 140 aaKnown RBP2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 NOXRED1Q6NXP6 359 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 VN1R4Q7Z5H5 301 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 IFT20Q8IY31 132 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 SLC35F6Q8N357 371 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 OTUD6BQ8N6M0 293 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 OR5K1Q8NHB7 308 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 C1orf54Q8WWF1 131 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 ANKRD7Q92527 254 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 KLK6Q92876 244 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 COX14Q96I36 57 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 EBNA1BP2Q99848 306 aaKnown RBP2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 KIFC1Q9BW19 673 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 VPREB3Q9UKI3 123 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 TSC2P49815 1807 aa2.51□□□□□ -2.01
CKS1BP1-201ENST00000555221 PATJQ8NI35 1801 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms