RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 ZNF596Q8TC21 504 aa17.4■□□□□ 0.38
ARHGEF40-204ENST00000555038 LSM4Q9Y4Z0 139 aaKnown RBP17.4■□□□□ 0.38
ARHGEF40-204ENST00000555038 E7EQL1 145 aa17.4■□□□□ 0.38
ARHGEF40-204ENST00000555038 APOA2P02652 100 aa17.4■□□□□ 0.38
ARHGEF40-204ENST00000555038 PRCDQ00LT1 54 aa17.4■□□□□ 0.38
ARHGEF40-204ENST00000555038 DMRTC2Q8IXT2 367 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF40-204ENST00000555038 B9A039 149 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 CLDN34H7C241 214 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 APOBEC3AP31941 199 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 AKR1D1P51857 326 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 FBXL19-AS1Q494R0 122 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 TMEM200BQ69YZ2 307 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 CCL17Q92583 94 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 NEIL1Q96FI4 390 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 SMIM7Q9BQ49 75 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 TXNDC17Q9BRA2 123 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 GGTLC1Q9BX51 225 aa17.39■□□□□ 0.37
ARHGEF40-204ENST00000555038 A0A1W2PPV4 95 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 UBE2CO00762 179 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 ATXN7O15265 892 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 TGOLN2O43493 480 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 RAB31Q13636 194 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 TMEM241Q24JQ0 296 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 ZCCHC24Q8N2G6 241 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 OR5B3Q8NH48 314 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 MGST2Q99735 147 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 TMPRSS5Q9H3S3 457 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 PLEKHA3Q9HB20 300 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 BSNQ9UPA5 3926 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 CD3EP07766 207 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 FAM87AP0C7U9 286 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 Q8WTZ3 238 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 METTL1Q9UBP6 276 aaKnown RBP17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 PXMP4Q9Y6I8 212 aa17.38■□□□□ 0.37
ARHGEF40-204ENST00000555038 J3QR06 171 aa17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 RPL35P42766 123 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 SNRPEP62304 92 aaKnown RBP17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 TEPPQ6URK8 271 aa17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 OR5AN1Q8NGI8 311 aa17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 TMEM186Q96B77 213 aa17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 TET2Q6N021 2002 aaPredicted RBP17.37■□□□□ 0.37
ARHGEF40-204ENST00000555038 ICE1Q9Y2F5 2266 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 HMGB3O15347 200 aaKnown RBP17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 YIF1AO95070 293 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 CA2P00918 260 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 OPN1MWP04001 364 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 OPN1MW2P0DN77 364 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 OPN1MW3P0DN78 364 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 TMEM177Q53S58 311 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 OR4F5Q8NH21 305 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 OR4F4Q96R69 305 aa17.36■□□□□ 0.37
ARHGEF40-204ENST00000555038 A0A087X0M5 115 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 A0A1B0GX30 115 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 PDE6DO43924 150 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 FSTL3O95633 263 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 IGHV2-5P01817 119 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 CCL3L1P16619 93 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 RPS10P46783 165 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 OR4A5Q8NH83 315 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 INS-IGF2F8WCM5 200 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 H0YJW9 148 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 PAGE4O60829 102 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 FCN3O75636 299 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 VENTXO95231 258 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 IGKV1-16P04430 117 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 S100A8P05109 93 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 CA7P43166 264 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 RPL29P47914 159 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 ZNF137PP52743 207 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 ERVFRD-1P60508 538 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 ARSJQ5FYB0 599 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 PDPNQ86YL7 162 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 H1FXQ92522 213 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 NEUROG1Q92886 237 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 MRPL20Q9BYC9 149 aaKnown RBP17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 PARLQ9H300 379 aa17.35■□□□□ 0.37
ARHGEF40-204ENST00000555038 TRBV23-1A0A0A0MS06 115 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 IGHV1-69-2A0A0G2JMI3 117 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 DVL1O14640 695 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 LAMA5O15230 3695 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 EIF3GO75821 320 aaKnown RBP eCLIP17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 STAG3L2P0CL84 134 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 STAG3L3P0CL85 134 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 C2orf83Q53S99 150 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 IQCF2Q8IXL9 164 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 VSTM2AQ8TAG5 236 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 NANPQ8TBE9 248 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 PCGF1Q9BSM1 259 aa17.34■□□□□ 0.37
ARHGEF40-204ENST00000555038 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 SRRM4A7MD48 611 aaKnown RBP17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 C11orf94C9JXX5 98 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 F6UZH7 168 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 AP4M1O00189 453 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 CXorf1O96002 111 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 SAA1P0DJI8 122 aaPredicted RBP17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 LOXP28300 417 aaPredicted RBP17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 BSXQ3C1V8 233 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 TMEM155Q4W5P6 130 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 ZNF343Q6P1L6 599 aa17.33■□□□□ 0.37
ARHGEF40-204ENST00000555038 LYPD2Q6UXB3 125 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms