RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 GNG12Q9UBI6 72 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 NAV3Q8IVL0 2385 aa7.41□□□□□ -1.22
SYNE2-217ENST00000555022 C15orf62A8K5M9 175 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 C17orf112F2Z3M2 114 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 M0R1X1 148 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 CA2P00918 260 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 HBZP02008 142 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 TYMSP04818 313 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 USF1P22415 310 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-217ENST00000555022 CA7P43166 264 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 PCBD1P61457 104 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 LCN2P80188 198 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 FBLN7Q53RD9 439 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 OR2Y1Q8NGV0 311 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 PPP1R14DQ9NXH3 145 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 LSM4Q9Y4Z0 139 aaKnown RBP7.4□□□□□ -1.22
SYNE2-217ENST00000555022 A8MXE2 369 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 MFAP2P55001 183 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 PLP2Q04941 152 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 TNXAQ16473 311 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 STUMQ69YW2 141 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 FOXL2NBQ6ZUU3 175 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 WDR86Q86TI4 376 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 GGNQ86UU5 652 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 OR8B2Q96RD0 313 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 MGST2Q99735 147 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 REPIN1Q9BWE0 567 aaKnown RBP7.4□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF355PQ9NSJ1 428 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 ZNRD1Q9P1U0 126 aa7.4□□□□□ -1.22
SYNE2-217ENST00000555022 IGHV3OR15-7A0A075B7D8 119 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 TRAV5A0A0B4J249 113 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 CORTO00230 105 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 IGFBP2P18065 325 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 TSPOP30536 169 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 SLAQ13239 276 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 SPATA12Q7Z6I5 190 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 SCCPDHQ8NBX0 429 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 OR4B1Q8NGF8 309 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 OR2D3Q8NGH3 330 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 OR4A16Q8NH70 328 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 RNF2Q99496 336 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 MED13Q9UHV7 2174 aa7.4□□□□□ -1.23
SYNE2-217ENST00000555022 EP300Q09472 2414 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-217ENST00000555022 TACC2O95359 2948 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 GCHFRP30047 84 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 BRWD1-AS2P59051 145 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 GNG3P63215 75 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 Q8N976 141 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 ZNF738Q8NE65 137 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 NEUROG1Q92886 237 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 LSM10Q969L4 123 aaKnown RBP7.39□□□□□ -1.23
SYNE2-217ENST00000555022 BET1LQ9NYM9 111 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 MED13LQ71F56 2210 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 NKX6-3A6NJ46 265 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 PDE6DO43924 150 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 NUDT3O95989 172 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 FABP6P51161 128 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 PAFAH1B2P68402 229 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 GAGE1Q13065 139 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 AMMECR1LQ6DCA0 310 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 SSX8Q7RTT4 187 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 RABEPKQ7Z6M1 372 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 OR2T6Q8NHC8 308 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 IGHV3-21A0A0B4J1V1 117 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 BMPR1BO00238 502 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 AGFG2O95081 481 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 VENTXO95231 258 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 IGLL1P15814 213 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 UBE2NP61088 152 aaKnown RBP7.39□□□□□ -1.23
SYNE2-217ENST00000555022 SELENOTP62341 195 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 FOXE3Q13461 319 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 TREML4Q6UXN2 200 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 Q6ZR03 302 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 OR13A1Q8NGR1 328 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 GALMQ96C23 342 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 EAF1Q96JC9 268 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-217ENST00000555022 C1QTNF5Q9BXJ0 243 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 HSPB7Q9UBY9 170 aa7.39□□□□□ -1.23
SYNE2-217ENST00000555022 MUC21A0A0G2JKD1 596 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 MUC21A0A140T8X8 626 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 A0A1W2PRD5 423 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 A0A1W2PRF3 423 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 A0A1W2PRM7 423 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 HELTA6NFD8 242 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 FBLL1A6NHQ2 334 aaKnown RBP7.38□□□□□ -1.23
SYNE2-217ENST00000555022 SAP30O75446 220 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 ZNF324O75467 553 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-217ENST00000555022 LYZL6O75951 148 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 LGALS4P56470 323 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 FXYD7P58549 80 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 TM4SF20Q53R12 229 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 MUC21Q5SSG8 566 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 FAM201AQ5SY85 155 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 NIT1Q86X76 327 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 TSKUQ8WUA8 353 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 KCNIP2Q9NS61 270 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 CDC42EP3Q9UKI2 254 aa7.38□□□□□ -1.23
SYNE2-217ENST00000555022 NCKAP5O14513 1909 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms