RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LDLRAD2Q5SZI1 272 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 DTD1Q8TEA8 209 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 MMP26Q9NRE1 261 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 BET1LQ9NYM9 111 aa7.21□□□□□ -1.25
TDP1-210ENST00000554976 BORCS7-ASMTA0A0B4J1R7 106 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 FBXO24O75426 580 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 CD81P60033 236 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 GNB2P62879 340 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 SRSF3P84103 164 aaKnown RBP7.21□□□□□ -1.26
TDP1-210ENST00000554976 LRRC75BQ2VPJ9 315 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 HLA-DRB5Q30154 266 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 OR4P4Q8NGL7 312 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 MISP3Q96FF7 219 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 UBTD1Q9HAC8 227 aa7.21□□□□□ -1.26
TDP1-210ENST00000554976 ANKHD1Q8IWZ3 2542 aaKnown RBP7.21□□□□□ -1.26
TDP1-210ENST00000554976 ICE1Q9Y2F5 2266 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 PPIAL4CA0A0B4J2A2 164 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 CGB1A6NKQ9 187 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 UPK2O00526 184 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 CRYGBP07316 175 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 PPIAL4GP0DN37 164 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 HIST1H1BP16401 226 aaKnown RBP7.2□□□□□ -1.26
TDP1-210ENST00000554976 EFNA4P52798 201 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 DLX1P56177 255 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 CLINT1Q14677 625 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 ABHD12Q8N2K0 398 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 OR13D1Q8NGV5 346 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 RAB1CQ92928 201 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 NUDT19A8MXV4 375 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 INS-IGF2F8WCM5 200 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 AP4M1O00189 453 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 METTL15P1P0C7V9 234 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 TMEM11P17152 192 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 NPBWR1P48145 328 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 PPT1P50897 306 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 PKIAP61925 76 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 PYY3Q5JQD4 70 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 IL34Q6ZMJ4 242 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 PDPNQ86YL7 162 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 KIR3DL3Q8N743 410 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 OR11H6Q8NGC7 330 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 OSR1Q8TAX0 266 aaPredicted RBP7.2□□□□□ -1.26
TDP1-210ENST00000554976 RAB39BQ96DA2 213 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 SEC11CQ9BY50 192 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 SLC35D1Q9NTN3 355 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 ZNF257Q9Y2Q1 563 aa7.2□□□□□ -1.26
TDP1-210ENST00000554976 BUB1B-PAK6H3BSN5 160 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 M0R1W7 72 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 ZFP36P26651 326 aaKnown RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 TMEM217Q8N7C4 229 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 RITA1Q96K30 269 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 WDR61Q9GZS3 305 aaKnown RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 ZFHX3Q15911 3703 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 ZNF705EA8MWA4 302 aaPredicted RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 VWC2LB2RUY7 222 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 SAA1P0DJI8 122 aaPredicted RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 MYOD1P15172 320 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 FHITP49789 147 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 RUNX1Q01196 453 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 EIF5AL1Q6IS14 154 aaKnown RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 CIB3Q96Q77 187 aaPredicted RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 PSMG3Q9BT73 122 aaPredicted RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 SSBP3Q9BWW4 388 aaPredicted RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 TCF19Q9Y242 345 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 POLR3KQ9Y2Y1 108 aaPredicted RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 DOCK11Q5JSL3 2073 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 A0A1B0GW64 132 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 DFFBO76075 338 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 KBTBD11O94819 623 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 IGHV4-39P01824 125 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 LIPFP07098 398 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 BLOC1S1P78537 153 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 RTL8BQ17RB0 113 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 SPINK9Q5DT21 86 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 SPSB3Q6PJ21 355 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 C1orf122Q6ZSJ8 110 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 HSD17B11Q8NBQ5 300 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 OR2G3Q8NGZ4 309 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 TIMD4Q96H15 378 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 SMCO4Q9NRQ5 59 aa7.19□□□□□ -1.26
TDP1-210ENST00000554976 STRAPQ9Y3F4 350 aaKnown RBP7.19□□□□□ -1.26
TDP1-210ENST00000554976 MAP1BP46821 2468 aaKnown RBP7.18□□□□□ -1.26
TDP1-210ENST00000554976 RP1L1Q8IWN7 2480 aaPredicted RBP7.18□□□□□ -1.26
TDP1-210ENST00000554976 A0A1W2PPI3 338 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 TSTD3H0UI37 97 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 HRASP01112 189 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 CD5P06127 495 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 LMO4P61968 165 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 PJVKQ0ZLH3 352 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 SPANXN5Q5MJ07 72 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 PVRIGQ6DKI7 326 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 Q6ZRG5 221 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 OR4A5Q8NH83 315 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 HIST1H2BAQ96A08 127 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 AJUBAQ96IF1 538 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 CLEC7AQ9BXN2 247 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 SIRPDQ9H106 197 aa7.18□□□□□ -1.26
TDP1-210ENST00000554976 CHTOPQ9Y3Y2 248 aaKnown RBP7.18□□□□□ -1.26
TDP1-210ENST00000554976 TIMM9Q9Y5J7 89 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms