RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SMR3AQ99954 134 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 RASL11BQ9BPW5 248 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 QTRT1Q9BXR0 403 aaKnown RBP11.47□□□□□ -0.57
SHOX2-206ENST00000554685 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
SHOX2-206ENST00000554685 NSG2Q9Y328 171 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 OR51B2Q9Y5P1 312 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 SOX21Q9Y651 276 aaPredicted RBP11.47□□□□□ -0.57
SHOX2-206ENST00000554685 CSMD1Q96PZ7 3565 aa11.47□□□□□ -0.57
SHOX2-206ENST00000554685 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 K7EPK0 472 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 C1QBP02746 253 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 PDLIM3Q53GG5 364 aaPredicted RBP11.46□□□□□ -0.57
SHOX2-206ENST00000554685 CXorf66Q5JRM2 361 aaPredicted RBP11.46□□□□□ -0.57
SHOX2-206ENST00000554685 FAM71E2Q8N5Q1 922 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 Q8N9W7 124 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 RAB40CQ96S21 281 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 ENY2Q9NPA8 101 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 PLSCR3Q9NRY6 295 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.57
SHOX2-206ENST00000554685 LSM5Q9Y4Y9 91 aaKnown RBP11.46□□□□□ -0.57
SHOX2-206ENST00000554685 CEBPZOSA8MTT3 80 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 L7N2F9 121 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 SYNGR2O43760 224 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 GPR137BO60478 399 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 HLA-DRB1P01911 266 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 VAMP2P63027 116 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 TNXAQ16473 311 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 ZFP69Q49AA0 526 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 SIGLECL1Q8N7X8 197 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 RBMXL1Q96E39 390 aaKnown RBP11.45□□□□□ -0.58
SHOX2-206ENST00000554685 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
SHOX2-206ENST00000554685 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 ZANQ9Y493 2812 aa11.45□□□□□ -0.58
SHOX2-206ENST00000554685 A0A1W2PN81 502 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 E5RGE8 158 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 SSSCA1O60232 199 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 DEDDO75618 318 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 CNIH1O95406 144 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 CA2P00918 260 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 IGHV4-59P01825 116 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 SLC25A4P12235 298 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 CHRNA7P36544 502 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 NUP62P37198 522 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 RPL27AP46776 148 aaKnown RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 HOXA1P49639 335 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 COMPP49747 757 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 TAS2R30P59541 319 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 PRCDQ00LT1 54 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 LY6EQ16553 131 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 HSD17B13Q7Z5P4 300 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 C5orf56Q8N8D9 126 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 DTD1Q8TEA8 209 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 ZNF418Q8TF45 676 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 HYLS1Q96M11 299 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 SRSF8Q9BRL6 282 aaKnown RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 HIPK2Q9H2X6 1198 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 RBKSQ9H477 322 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 PLEKHA3Q9HB20 300 aa11.44□□□□□ -0.58
SHOX2-206ENST00000554685 RCL1Q9Y2P8 373 aaKnown RBP11.44□□□□□ -0.58
SHOX2-206ENST00000554685 TRAV14DV4A0A0A6YYC5 116 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 TEX50A0A1B0GTY4 177 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 NXPH3O95157 252 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 LYL1P12980 280 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 RPL23AP62750 156 aaKnown RBP11.43□□□□□ -0.58
SHOX2-206ENST00000554685 GNB1P62873 340 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 RPP30P78346 268 aaKnown RBP11.43□□□□□ -0.58
SHOX2-206ENST00000554685 FBLN7Q53RD9 439 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 ZNF562Q6V9R5 426 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 MAGT1Q9H0U3 335 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 NDUFA4L2Q9NRX3 87 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 MBD2Q9UBB5 411 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 WSB1Q9Y6I7 421 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 CSPG4Q6UVK1 2322 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 TEX15Q9BXT5 2789 aa11.43□□□□□ -0.58
SHOX2-206ENST00000554685 FXYD6-FXYD2A0A087WZ82 144 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 INS-IGF2F8WCM5 200 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
SHOX2-206ENST00000554685 CHST1O43916 411 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 SCAF4O95104 1147 aaKnown RBP11.42□□□□□ -0.58
SHOX2-206ENST00000554685 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHOX2-206ENST00000554685 P2RY1P47900 373 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 ERHP84090 104 aaKnown RBP11.42□□□□□ -0.58
SHOX2-206ENST00000554685 PJVKQ0ZLH3 352 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 FXYD3Q14802 87 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 TMEM65Q6PI78 240 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 NOXA1Q86UR1 476 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 SRSF12Q8WXF0 261 aaKnown RBP11.42□□□□□ -0.58
SHOX2-206ENST00000554685 DCUN1D4Q92564 292 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 SMIM8Q96KF7 97 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 HINT2Q9BX68 163 aa11.42□□□□□ -0.58
SHOX2-206ENST00000554685 HEYLQ9NQ87 328 aaPredicted RBP11.42□□□□□ -0.58
SHOX2-206ENST00000554685 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms