RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 UBE2WQ96B02 151 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 SF3B6Q9Y3B4 125 aaKnown RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PGPA6NDG6 321 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ARRDC5A6NEK1 342 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 HYPMO75409 117 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 LINC00869P0C866 280 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 STHQ8IWL8 128 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 NEIL1Q96FI4 390 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 GPR137Q96N19 417 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 OR2V2Q96R30 315 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CHD8Q9HCK8 2581 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ADAMTS7Q9UKP4 1686 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 IGF2P01344 180 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ESDP10768 282 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 INO80CQ6PI98 192 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF562Q6V9R5 426 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 LYPD6BQ8NI32 183 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ELSPBP1Q96BH3 223 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF707Q96C28 371 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 FBXL7Q9UJT9 491 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PLPP1O14494 284 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PROP1O75360 226 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 LIMS3P0CW19 117 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 LIMS4P0CW20 117 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CNTFRP26992 372 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 P2RY4P51582 365 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PMCHL1Q16048 86 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ACTL10Q5JWF8 245 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 RCC2Q9P258 522 aaKnown RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 A0A0J9YWU9 116 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 GAGE2BQ13066 116 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 OR4D5Q8NGN0 318 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 B9D1Q9UPM9 204 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 LANCL1O43813 399 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 HBDP02042 147 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CELA3BP08861 270 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CAPZBP47756 277 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 GNG5P63218 68 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PSMG4Q5JS54 123 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 DND1Q8IYX4 353 aaKnown RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 TBX21Q9UL17 535 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 IGSF23A1L1A6 192 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 HLA-DQA1P01909 254 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PAX9P55771 341 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 NDPQ00604 133 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 FOXI1Q12951 378 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 RASL11AQ6T310 242 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 MBD3L1Q8WWY6 194 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 SEMA5BQ9P283 1151 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 MYO9AB2RTY4 2548 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 RBFOX2O43251 390 aaKnown RBP eCLIP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CD99P14209 185 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 NKG7Q16617 165 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CD300EQ496F6 205 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 FIZ1Q96SL8 496 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 TRAV41A0A0B4J266 112 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 RING1Q06587 406 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 RPL39P5Q59GN2 51 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM78Q5T7P6 136 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 LRTM2Q8N967 370 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 IMMP2LQ96T52 175 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 C1RLQ9NZP8 487 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 MSRB2Q9Y3D2 182 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 COL11A2P13942 1736 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 hADV29S1A0JD25 119 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CORTO00230 105 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 TCRAP04437 139 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ICAM4Q14773 271 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 C4orf45Q96LM5 186 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 PARLQ9H300 379 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 WDR88Q6ZMY6 472 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 C10orf111Q8N326 155 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 A0A1W2PP11 408 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 SNRPGP15A8MWD9 76 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 HPXP02790 462 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 IGHV4-30-4P0DP06 118 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 IGHV4-31P0DP07 118 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 SELLP14151 372 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 KLF17Q5JT82 389 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 THYN1Q9P016 225 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 TLN2Q9Y4G6 2542 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF253O75346 499 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 VAX1Q5SQQ9 334 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 SLC35E3Q7Z769 313 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 OSR1Q8TAX0 266 aaPredicted RBP2.83□□□□□ -1.96
SYNE2-212ENST00000554584 RNF183Q96D59 192 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF665Q9H7R5 613 aa2.83□□□□□ -1.96
SYNE2-212ENST00000554584 DDX60LQ5H9U9 1706 aaKnown RBP2.82□□□□□ -1.96
SYNE2-212ENST00000554584 IFITM5A6NNB3 132 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 TOMM40O96008 361 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 CCL3L1P16619 93 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 LINC00596Q86U02 117 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 ST8SIA1Q92185 356 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 DLX4Q92988 240 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-212ENST00000554584 CALYQ9NYX4 217 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 OPN4Q9UHM6 478 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 THBDP07204 575 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 MUC1P15941 1255 aaPredicted RBP2.82□□□□□ -1.96
SYNE2-212ENST00000554584 SPATA45Q537H7 98 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms