RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CCDC71LQ8N9Z2 235 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 OR51H1Q8NH63 302 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 MPLKIPQ8TAP9 179 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 TCTEX1D2Q8WW35 142 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 C22orf15Q8WYQ4 148 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 ADTRPQ96IZ2 230 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 ZNF48Q96MX3 618 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 TP53RKQ96S44 253 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 S1PR3Q99500 378 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 HSD17B10Q99714 261 aaKnown RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 BEX2Q9BXY8 128 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 ALX4Q9H161 411 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-212ENST00000554486 NAA60Q9H7X0 242 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 BEX1Q9HBH7 125 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 HSPB7Q9UBY9 170 aa5.02□□□□□ -1.61
SCFD1-212ENST00000554486 A0A0B4J293 547 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 TEX13DA0A0J9YY54 714 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-212ENST00000554486 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 INMT-MINDY4F8WBC2 141 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 TXNL1O43396 289 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 RAMP3O60896 148 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 VENTXO95231 258 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 IL5P05113 134 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 FBP1P09467 338 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 OR4E1P0C645 316 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 F2RP25116 425 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 S100GP29377 79 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 SRP14P37108 136 aaKnown RBP5.01□□□□□ -1.61
SCFD1-212ENST00000554486 THBS3P49746 956 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 TAS2R31P59538 309 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 UBE2MP61081 183 aaKnown RBP5.01□□□□□ -1.61
SCFD1-212ENST00000554486 RPP30P78346 268 aaKnown RBP5.01□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM187Q14656 261 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 SLC9A3R2Q15599 337 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 TRIM16LQ309B1 348 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 SP6Q3SY56 376 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 ZNF585BQ52M93 769 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 OR2B11Q5JQS5 317 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 KCTD9Q7L273 389 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 MOB3BQ86TA1 216 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 TEX29Q8N6K0 151 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 MINDY2Q8NBR6 621 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 OR52B4Q8NGK2 314 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 PIFOQ8TCI5 191 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 GALNT14Q96FL9 552 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 SEC22CQ9BRL7 303 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 SLC35D1Q9NTN3 355 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 PEMTQ9UBM1 199 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 FAM96BQ9Y3D0 163 aa5.01□□□□□ -1.61
SCFD1-212ENST00000554486 C3orf85A0A1B0GTC6 90 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 C9orf170A2RU37 121 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 RNF212BA8MTL3 300 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 VGLL3A8MV65 326 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 INAFM1C9JVW0 142 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 H0Y980 276 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 RBFOX2O43251 390 aaKnown RBP eCLIP5□□□□□ -1.61
SCFD1-212ENST00000554486 FCGR3BO75015 233 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 SFT2D2O95562 160 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV1-39P01597 117 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 APOA2P02652 100 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV1-16P04430 117 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 IGKV1D-39P04432 117 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 SNRNP70P08621 437 aaKnown RBP5□□□□□ -1.61
SCFD1-212ENST00000554486 OR5AC1P0C628 307 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 EDN2P20800 178 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 HNF1AP20823 631 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 CD24P25063 80 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 UCP1P25874 307 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 CD1BP29016 333 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 KIR2DS2P43631 304 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 RAB13P51153 203 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 DYNLT3P51808 116 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 CATR1Q13166 79 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 DHRS2Q13268 280 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 LRRC75BQ2VPJ9 315 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 ANKRD55Q3KP44 614 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM128Q5BJH2 165 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 LYG2Q86SG7 212 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 PDPNQ86YL7 162 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 SGPP2Q8IWX5 399 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 SPAG16Q8N0X2 631 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 Q8N6K4 173 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 TCTEX1D1Q8N7M0 179 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 LHFPL5Q8TAF8 219 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 GLYATL2Q8WU03 294 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM170AQ8WVE7 144 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 SSX3Q99909 188 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 TMEM222Q9H0R3 208 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 FAM212BQ9NTI7 297 aaPredicted RBP5□□□□□ -1.61
SCFD1-212ENST00000554486 PRELID3BQ9Y3B1 194 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 WASHC3Q9Y3C0 194 aa5□□□□□ -1.61
SCFD1-212ENST00000554486 TET2Q6N021 2002 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 IGLV5-39A0A0G2JS06 123 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 C7orf66A4D0T2 115 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 SRRM4A7MD48 611 aaKnown RBP4.99□□□□□ -1.61
SCFD1-212ENST00000554486 H3BUX3 64 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 H7C2Y5 167 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 PRAF2O60831 178 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 B3GALNT1O75752 331 aa4.99□□□□□ -1.61
SCFD1-212ENST00000554486 S1PR2O95136 353 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms