RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 HBA1P69905 142 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 BAMBIQ13145 260 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 WDR59Q6PJI9 974 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 Q6Q795 121 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 TCF24Q7RTU0 167 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 ZNF101Q8IZC7 436 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 RNF182Q8N6D2 247 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 ZNF283Q8N7M2 679 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 OR9Q1Q8NGQ5 310 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 RNASE11Q8TAA1 199 aaKnown RBP2.83□□□□□ -1.96
SCFD1-211ENST00000554437 CD200R1Q8TD46 325 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 LMX1AQ8TE12 382 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 SLC7A6Q92536 515 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 PLEKHB2Q96CS7 222 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 IGF2BP2-AS1Q96M15 143 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 PFDN5Q99471 154 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 HSPB9Q9BQS6 159 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 C1QTNF6Q9BXI9 259 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 NKX6-2Q9C056 277 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-211ENST00000554437 C11orf68Q9H3H3 251 aaKnown RBP2.83□□□□□ -1.96
SCFD1-211ENST00000554437 TVP23BQ9NYZ1 205 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 ASB4Q9Y574 426 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 SSH2Q76I76 1423 aa2.83□□□□□ -1.96
SCFD1-211ENST00000554437 TRAV9-1A0A075B6T8 112 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 TRAV4A0A0B4J268 109 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 DPRXA6NFQ7 191 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 RBFOX2O43251 390 aaKnown RBP eCLIP2.82□□□□□ -1.96
SCFD1-211ENST00000554437 NDUFA2O43678 99 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 BANF1O75531 89 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 GADD45GO95257 159 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 CSN2P05814 226 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 RPS4Y1P22090 263 aaKnown RBP2.82□□□□□ -1.96
SCFD1-211ENST00000554437 NPY1RP25929 384 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 AKR1C3P42330 323 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 SERPINB10P48595 397 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 ENDOGQ14249 297 aaKnown RBP2.82□□□□□ -1.96
SCFD1-211ENST00000554437 SMIM21Q3B7S5 101 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 ZFAND6Q6FIF0 208 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 GPHB5Q86YW7 130 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 EXOC3-AS1Q8N2X6 119 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 ZNF709Q8N972 641 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 OR11G2Q8NGC1 345 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 OR4K13Q8NH42 304 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 DEDD2Q8WXF8 326 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 OR5P3Q8WZ94 311 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 CAPZA3Q96KX2 299 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 GABARAPL1Q9H0R8 117 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 PHLDA3Q9Y5J5 127 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 DENND4BO75064 1496 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-211ENST00000554437 MYO5BQ9ULV0 1848 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 KMT2EQ8IZD2 1858 aa2.82□□□□□ -1.96
SCFD1-211ENST00000554437 A0A1B0GW54 56 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 IGLL5B9A064 214 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 C9JCJ5 164 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 J3QRK9 145 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 PLA2G10O15496 165 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 PIAS1O75925 651 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 OR2J2O76002 312 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 ADRA2AP08913 450 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 SRP19P09132 144 aaKnown RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 MUC1P15941 1255 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 NTF3P20783 257 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 TBPL1P62380 186 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 LTC4SQ16873 150 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 PRSS54Q6PEW0 395 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 IGFL1Q6UW32 110 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 CLVS1Q8IUQ0 354 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 ZFP62Q8NB50 900 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 OR4D11Q8NGI4 311 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 RBPMSQ93062 196 aaKnown RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 TOMM6Q96B49 74 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 CCDC115Q96NT0 180 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 OR2D2Q9H210 308 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 ZNF586Q9NXT0 402 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 RPUSD1Q9UJJ7 312 aaKnown RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 NID2Q14112 1375 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 TNS2Q63HR2 1409 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 CEP152O94986 1710 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 KIF26AQ9ULI4 1882 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-211ENST00000554437 PCM1Q15154 2024 aa2.81□□□□□ -1.96
SCFD1-211ENST00000554437 TSPOAP1O95153 1857 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 ITGB4P16144 1822 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 PTPRTO14522 1441 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 ABCC12Q96J65 1359 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 DEGS1O15121 323 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 CCNKO75909 580 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 BPGMP07738 259 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 CGB3P0DN86 165 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 CGB7P0DN87 165 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 GPX2P18283 190 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 S100A1P23297 94 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 S100A7P31151 101 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 RAB13P51153 203 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 CKS1BP61024 79 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 FKBP1AP62942 108 aaKnown RBP2.8□□□□□ -1.96
SCFD1-211ENST00000554437 DHRS2Q13268 280 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 LYRM7Q5U5X0 104 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 MIR7-3HGQ8N6C7 128 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 OR8J3Q8NGG0 315 aa2.8□□□□□ -1.96
SCFD1-211ENST00000554437 THEM6Q8WUY1 208 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms