RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 KLK9Q9UKQ9 250 aa14.15□□□□□ -0.14
CPSF2-203ENST00000554290 TRBV7-1A0A0A6YYK4 115 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 LOC100506127A0A0U1RQW1 187 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 ZNF320A2RRD8 509 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 ATP6V1G2O95670 118 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 PTHLHP12272 177 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 CBX5P45973 191 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 TAS2R31P59538 309 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 TIMM50Q3ZCQ8 353 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 SLC16A13Q7RTY0 426 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 SRD5A3Q9H8P0 318 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 RETNQ9HD89 108 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 S4R3C0 116 aa14.14□□□□□ -0.15
CPSF2-203ENST00000554290 SULT1C2O00338 296 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 HPRT1P00492 218 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 REG1AP05451 166 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 ZNF57Q68EA5 555 aaPredicted RBP14.13□□□□□ -0.15
CPSF2-203ENST00000554290 GIMAP1Q8WWP7 306 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 BORCS5Q969J3 196 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 WDR89Q96FK6 387 aaPredicted RBP14.13□□□□□ -0.15
CPSF2-203ENST00000554290 RNF167Q9H6Y7 350 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 AUNIPQ9H7T9 357 aa14.13□□□□□ -0.15
CPSF2-203ENST00000554290 IGLV11-55A0A075B6I3 123 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 RBMY1BA6NDE4 496 aaKnown RBP14.12□□□□□ -0.15
CPSF2-203ENST00000554290 RBMY1EA6NEQ0 496 aaKnown RBP14.12□□□□□ -0.15
CPSF2-203ENST00000554290 A8MWP6 167 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 TMEM127O75204 238 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 RBMY1DP0C7P1 496 aaKnown RBP14.12□□□□□ -0.15
CPSF2-203ENST00000554290 MYOD1P15172 320 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 NQO2P16083 231 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 EDN2P20800 178 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 FXYD4P59646 89 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 OR2B8PP59922 312 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 OR5AP2Q8NGF4 316 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 CD300LFQ8TDQ1 290 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 COMMD5Q9GZQ3 224 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 THYN1Q9P016 225 aa14.12□□□□□ -0.15
CPSF2-203ENST00000554290 CGB1A6NKQ9 187 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 UPK2O00526 184 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 CYB5BO43169 146 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 CLEC3BP05452 202 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 POU2AF1Q16633 256 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 ANKRD55Q3KP44 614 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 UXS1Q8NBZ7 420 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 DMBX1Q8NFW5 382 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 CACNG8Q8WXS5 425 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 MARC2Q969Z3 335 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 FAM110AQ9BQ89 295 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 SRSF8Q9BRL6 282 aaKnown RBP14.11□□□□□ -0.15
CPSF2-203ENST00000554290 WFDC10AQ9H1F0 79 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 PLEKHA2Q9HB19 425 aa14.11□□□□□ -0.15
CPSF2-203ENST00000554290 TMEM213A2RRL7 107 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 FCER2P06734 321 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 FGF2P09038 288 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 HERV-K104P61576 105 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 NEDD8Q15843 81 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 TMEM17Q86X19 198 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 TMEM61Q8N0U2 210 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 OR52B4Q8NGK2 314 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 OR51H1Q8NH63 302 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 IFT46Q9NQC8 304 aa14.1□□□□□ -0.15
CPSF2-203ENST00000554290 DNAH7Q8WXX0 4024 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 IGLC7A0M8Q6 106 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 MFSD2BA6NFX1 497 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 AADACL3Q5VUY0 350 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 ZNF818PQ6ZRF7 136 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 CROCCP3Q8IVE0 287 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 S100A16Q96FQ6 103 aaKnown RBP14.09□□□□□ -0.15
CPSF2-203ENST00000554290 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
CPSF2-203ENST00000554290 TMEM140Q9NV12 185 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 MLXQ9UH92 298 aa14.09□□□□□ -0.15
CPSF2-203ENST00000554290 TRAV3A0A0B4J244 114 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 TRAV25A0A0B4J276 109 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 XRCC3O43542 346 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 JTBO76095 146 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 PTBP1P26599 531 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPSF2-203ENST00000554290 ERVK-16P61578 105 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 THOC7Q6I9Y2 204 aaKnown RBP14.08□□□□□ -0.16
CPSF2-203ENST00000554290 PLET1Q6UQ28 207 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 ZNF502Q8TBZ5 544 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 EHFQ9NZC4 300 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 COMMD9Q9P000 198 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 MRPL27Q9P0M9 148 aaKnown RBP14.08□□□□□ -0.16
CPSF2-203ENST00000554290 UFC1Q9Y3C8 167 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 SELENOKQ9Y6D0 94 aa14.08□□□□□ -0.16
CPSF2-203ENST00000554290 MEIS3P1A6NDR6 274 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 SCAF4O95104 1147 aaKnown RBP14.07□□□□□ -0.16
CPSF2-203ENST00000554290 S1PR2O95136 353 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 TRAPPC2P0DI81 140 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 TRAPPC2BP0DI82 140 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 GNRHRP30968 328 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 GPR183P32249 361 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 ELLP55199 621 aaPredicted RBP14.07□□□□□ -0.16
CPSF2-203ENST00000554290 TM4SF20Q53R12 229 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 BTNL8Q6UX41 500 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 RBPMS2Q6ZRY4 209 aaKnown RBP14.07□□□□□ -0.16
CPSF2-203ENST00000554290 HSD17B13Q7Z5P4 300 aaPredicted RBP14.07□□□□□ -0.16
CPSF2-203ENST00000554290 VN1R17PQ8TDU5 208 aa14.07□□□□□ -0.16
CPSF2-203ENST00000554290 C8orf88P0DMB2 117 aa14.06□□□□□ -0.16
CPSF2-203ENST00000554290 ZNF585BQ52M93 769 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms