RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 A0A1B0GVG6 124 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 A0A1W2PN81 502 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 DNAJC9-AS1A6NH13 148 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 ST8SIA3O43173 380 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 PITX3O75364 302 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 CA2P00918 260 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 IFNA17P01571 189 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 CXCL3P19876 107 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 PVALBP20472 110 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-210ENST00000553950 CHRNA7P36544 502 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 RPL27AP46776 148 aaKnown RBP11.55□□□□□ -0.56
SHMT2-210ENST00000553950 F2RL1P55085 397 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 HILS1P60008 231 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 SPCS3P61009 180 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 TNFRSF9Q07011 255 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 TNXAQ16473 311 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-210ENST00000553950 OR1L8Q8NGR8 309 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 OR10C1Q96KK4 312 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 QTRT1Q9BXR0 403 aaKnown RBP11.55□□□□□ -0.56
SHMT2-210ENST00000553950 ENY2Q9NPA8 101 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 GSKIPQ9P0R6 139 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
SHMT2-210ENST00000553950 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-210ENST00000553950 MPTX1A8MV57 137 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 CCNKO75909 580 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 SCAF4O95104 1147 aaKnown RBP11.54□□□□□ -0.56
SHMT2-210ENST00000553950 CNIH1O95406 144 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 SCGB1D2O95969 90 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 RLN2P04090 185 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 HOXA1P49639 335 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-210ENST00000553950 COMPP49747 757 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-210ENST00000553950 HSPE1P61604 102 aaKnown RBP11.54□□□□□ -0.56
SHMT2-210ENST00000553950 PRCDQ00LT1 54 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 C2orf68Q2NKX9 166 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 ZNF562Q6V9R5 426 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 Q71RC1 249 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-210ENST00000553950 ARPC1AQ92747 370 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 RITA1Q96K30 269 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 CHIAQ9BZP6 476 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 TPSG1Q9NRR2 321 aa11.54□□□□□ -0.56
SHMT2-210ENST00000553950 TCF21O43680 179 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 SIX6O95475 246 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 RNASE1P07998 156 aaKnown RBP11.53□□□□□ -0.56
SHMT2-210ENST00000553950 S100A10P60903 97 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 GNB1P62873 340 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 CD83Q01151 205 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 SRSF12Q8WXF0 261 aaKnown RBP11.53□□□□□ -0.56
SHMT2-210ENST00000553950 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 NSG2Q9Y328 171 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 MTORP42345 2549 aa11.53□□□□□ -0.56
SHMT2-210ENST00000553950 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 INS-IGF2F8WCM5 200 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 TRIM77I1YAP6 450 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 SYNGR2O43760 224 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 CHST1O43916 411 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 GPR137BO60478 399 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 PSMB6P28072 239 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
SHMT2-210ENST00000553950 ID3Q02535 119 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 FXYD3Q14802 87 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 IZUMO4Q1ZYL8 232 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 FBLN7Q53RD9 439 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 Q6ZRM9 215 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 PPP1R1CQ8WVI7 109 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 TMEM68Q96MH6 324 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 PRSS22Q9GZN4 317 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 HIPK2Q9H2X6 1198 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 ZNF580Q9UK33 172 aa11.52□□□□□ -0.57
SHMT2-210ENST00000553950 SVEP1Q4LDE5 3571 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 TRAV3A0A0B4J244 114 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 L7N2F9 121 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 CYB5BO43169 146 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 PFDN1O60925 122 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 TSPAN9O75954 239 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 CRYBA1P05813 215 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 TAS2R30P59541 319 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 VAMP2P63027 116 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 CX3CL1P78423 397 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 IL15RAQ13261 267 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 SLC35E3Q7Z769 313 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 NOXA1Q86UR1 476 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 OR2T35Q8NGX2 323 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 THAP6Q8TBB0 222 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
SHMT2-210ENST00000553950 PLXNB1O43157 2135 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 IGHV7-81A0A0B4J1V7 117 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 K7EPK0 472 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 SSSCA1O60232 199 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 DEDDO75618 318 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 IGHG2P01859 326 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 CRIP2P52943 208 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 ATP5IP56385 69 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 RPL23AP62750 156 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms