RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 G3V3Q6 166 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 L7N2F9 121 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 DEDDO75618 318 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 SPDEFO95238 335 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 MOSP00540 346 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 FAM106CPP0CH98 169 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 LYL1P12980 280 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 UBE2KP61086 200 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 VAMP2P63027 116 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 Q5BKY6 102 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 LDLRAD2Q5SZI1 272 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 Q6ZRM9 215 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 ZNF546Q86UE3 836 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 INO80EQ8NBZ0 244 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-208ENST00000553868 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 DCUN1D4Q92564 292 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 NSG2Q9Y328 171 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 FAM96BQ9Y3D0 163 aa11.57□□□□□ -0.56
SHMT2-208ENST00000553868 RYR2Q92736 4967 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 UPK2O00526 184 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 GPR137BO60478 399 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 FGF2P09038 288 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 SAA1P0DJI8 122 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-208ENST00000553868 TNFRSF9Q07011 255 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 IZUMO4Q1ZYL8 232 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 AARDQ4LEZ3 155 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 CXorf66Q5JRM2 361 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-208ENST00000553868 RBMS3Q6XE24 437 aaKnown RBP11.56□□□□□ -0.56
SHMT2-208ENST00000553868 ZNF429Q86V71 674 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 THNSL2Q86YJ6 484 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 VKORC1L1Q8N0U8 176 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 PUSL1Q8N0Z8 303 aaKnown RBP11.56□□□□□ -0.56
SHMT2-208ENST00000553868 TEX45Q8NA69 505 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 OR11H4Q8NGC9 324 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 NANPQ8TBE9 248 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 CFHR4Q92496 578 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 RAB40CQ96S21 281 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 CLCC1Q96S66 551 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 HSPB7Q9UBY9 170 aa11.56□□□□□ -0.56
SHMT2-208ENST00000553868 FOXA2Q9Y261 457 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-208ENST00000553868 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 M0QZ24 198 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 ARPC5O15511 151 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 SYNGR2O43760 224 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 KBTBD11O94819 623 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 TSPAN15O95858 294 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 IFNA17P01571 189 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 NKX2-5P52952 324 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-208ENST00000553868 SPCS3P61009 180 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 POLR2GP62487 172 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHMT2-208ENST00000553868 RELBQ01201 579 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 HES1Q14469 280 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 BCL6BQ8N143 479 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-208ENST00000553868 PIP4P2Q8N4L2 257 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 OR8H1Q8NGG4 311 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 TMEM167AQ8TBQ9 72 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-208ENST00000553868 RNF126Q9BV68 326 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 MFFQ9GZY8 342 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 KIAA1456Q9P272 454 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 NUP50Q9UKX7 468 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 RCL1Q9Y2P8 373 aaKnown RBP11.55□□□□□ -0.56
SHMT2-208ENST00000553868 ZNF257Q9Y2Q1 563 aa11.55□□□□□ -0.56
SHMT2-208ENST00000553868 IGHV3OR16-10A0A075B7F0 116 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 A0A0D9SG52 128 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 SRRM4A7MD48 611 aaKnown RBP11.54□□□□□ -0.56
SHMT2-208ENST00000553868 G3V4G9 280 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 H0YIZ8 118 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 SSSCA1O60232 199 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 OR2F2O95006 317 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 FSHBP01225 129 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 IGKV1D-33P01593 117 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 IGKV1-33P01594 117 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 SNRNP70P08621 437 aaKnown RBP11.54□□□□□ -0.56
SHMT2-208ENST00000553868 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-208ENST00000553868 FBP1P09467 338 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 IGHV4-38-2P0DP08 117 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 P2RY1P47900 373 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 DYNLT3P51808 116 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 TAS2R30P59541 319 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 OR2B8PP59922 312 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 KRTAP10-3P60369 221 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 RPL23AP62750 156 aaKnown RBP11.54□□□□□ -0.56
SHMT2-208ENST00000553868 OR2F1Q13607 317 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 EBI3Q14213 229 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 PSG5Q15238 335 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 RUSC1-AS1Q66K80 236 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 ACOT7LQ6ZUV0 252 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 OR5B3Q8NH48 314 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 GRPEL2Q8TAA5 225 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 ZNF48Q96MX3 618 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-208ENST00000553868 MEGF9Q9H1U4 602 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 ZC4H2Q9NQZ6 224 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 TMEM14BQ9NUH8 114 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 OR5AC2Q9NZP5 309 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
SHMT2-208ENST00000553868 TNFSF18Q9UNG2 199 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms