RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LCN9Q8WX39 176 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 RBPMSQ93062 196 aaKnown RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 WDR34Q96EX3 536 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 FAM210AQ96ND0 272 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 OLFM3Q96PB7 478 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 TRIB3Q96RU7 358 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 LYSMD1Q96S90 227 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 PEBP4Q96S96 227 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF649Q9BS31 505 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 EBPLQ9BY08 206 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 NSRP1Q9H0G5 558 aaKnown RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 FBXL15Q9H469 300 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 C3orf18Q9UK00 162 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 TRAPPC1Q9Y5R8 145 aa1.82□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF706Q9Y5V0 76 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-210ENST00000553693 DYSFO75923 2080 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 IGLV3-12A0A075B6K2 115 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 A0A1B0GX78 115 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 GOLGA6L4A6NEF3 574 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 OR6C70A6NIJ9 312 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 KLRC4-KLRK1H3BQV0 150 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 RPL36A-HNRNPH2H7BZ11 118 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 K7EPK0 472 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 UPK1AO00322 258 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 MFNGO00587 321 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 GPR171O14626 319 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 PFDN6O15212 129 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 GYG2O15488 501 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF207O43670 478 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 KLHL2O95198 593 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 MPZL1O95297 269 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 CA2P00918 260 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 S100A6P06703 90 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 UQCRHP07919 91 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF35P13682 527 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 HLA-DMAP28067 261 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 PEBP1P30086 187 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 AGTR1P30556 359 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 CDC34P49427 236 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 CEBPGP53567 150 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 EMP2P54851 167 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 OR10A3P58181 314 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 RPL26P61254 145 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF816Q0VGE8 651 aaPredicted RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 FAM162BQ5T6X4 162 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 LPCAT4Q643R3 524 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 PAGE2Q7Z2X7 111 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 DPPA2Q7Z7J5 298 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 PRNTQ86SH4 94 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 MIR7-3HGQ8N6C7 128 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 LINC00304Q8N9R0 145 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 OR52E4Q8NGH9 312 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 CCL17Q92583 94 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 C18orf15Q96N68 181 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 MCEEQ96PE7 176 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 GPR22Q99680 433 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 SNRNP25Q9BV90 132 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 MRPS26Q9BYN8 205 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 SLC19A3Q9BZV2 496 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 OR51B6Q9H340 312 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 RPL26L1Q9UNX3 145 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 FAM215AQ9Y5M1 114 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 CNTRLQ7Z7A1 2325 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 NBEAL2Q6ZNJ1 2754 aa1.81□□□□□ -2.12
SCFD1-210ENST00000553693 INTS1Q8N201 2190 aaKnown RBP1.81□□□□□ -2.12
SCFD1-210ENST00000553693 RYR3Q15413 4870 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 CPAMD8Q8IZJ3 1885 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 TENM1Q9UKZ4 2725 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 CHD3Q12873 2000 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 ANKRD12Q6UB98 2062 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 IGHV2-26A0A0B4J1V2 119 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 A0A0J9YY10 115 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 METTL15A6NJ78 407 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 B4DEV8 164 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 LRRN3E7EW58 273 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 GOLGA6L19H0YKK7 550 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 J3QLI3 93 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 SYNGR1O43759 233 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 ADAP1O75689 374 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 ARL6IP5O75915 188 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 IGHV1-46P01743 117 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 STATHP02808 62 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 IGLV7-43P04211 117 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 HLA-DQB2P05538 268 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 GTF2F2P13984 249 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 M6PRP20645 277 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 PSMA1P25786 263 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 MIPP30301 263 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 GRPRP30550 384 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 IDH2P48735 452 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 GABARAPL2P60520 117 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 RAB2AP61019 212 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 FAM3AP98173 230 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 C1DQ13901 141 aaKnown RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 UAP1Q16222 522 aaPredicted RBP1.8□□□□□ -2.12
SCFD1-210ENST00000553693 MAPK14Q16539 360 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 SLC36A2Q495M3 483 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 CENPWQ5EE01 88 aa1.8□□□□□ -2.12
SCFD1-210ENST00000553693 TIMM23BQ5SRD1 257 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms