RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CADM3Q8N126 398 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 OR4A16Q8NH70 328 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 TMEM230Q96A57 120 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 GALNT14Q96FL9 552 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 FKBP11Q9NYL4 201 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 STAB1Q9NY15 2570 aa10.86□□□□□ -0.67
TUBB3-202ENST00000553656 A0A1W2PRX2 142 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 IGKV1-39P01597 117 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 IGKV1D-39P04432 117 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 APELAP0DMC3 54 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
TUBB3-202ENST00000553656 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 TMEM268Q5VZI3 342 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 SLC25A42Q86VD7 318 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 MINDY2Q8NBR6 621 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 RBPMSQ93062 196 aaKnown RBP10.85□□□□□ -0.67
TUBB3-202ENST00000553656 SEC22AQ96IW7 307 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 ZFP57Q9NU63 452 aa10.85□□□□□ -0.67
TUBB3-202ENST00000553656 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
TUBB3-202ENST00000553656 TRAV3A0A0B4J244 114 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 FAM240BA0A1B0GVZ2 78 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 NUDT19A8MXV4 375 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 CDS2O95674 445 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 PSMB8P28062 276 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 BTCP35070 178 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 RAB25P57735 213 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 DEFA1P59665 94 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 DEFA3P59666 94 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 OR2B8PP59922 312 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 UBE2MP61081 183 aaKnown RBP10.84□□□□□ -0.67
TUBB3-202ENST00000553656 ASAH1Q13510 395 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 C19orf54Q5BKX5 351 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 HIST2H2BDQ6DRA6 164 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 THOC7Q6I9Y2 204 aaKnown RBP10.84□□□□□ -0.67
TUBB3-202ENST00000553656 MRPL41Q8IXM3 137 aaKnown RBP10.84□□□□□ -0.67
TUBB3-202ENST00000553656 LGI3Q8N145 548 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 OR5T1Q8NG75 326 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 OR1L8Q8NGR8 309 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 GLYATL2Q8WU03 294 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 QTRT1Q9BXR0 403 aaKnown RBP10.84□□□□□ -0.67
TUBB3-202ENST00000553656 COA4Q9NYJ1 87 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 NSG2Q9Y328 171 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 OR51B2Q9Y5P1 312 aa10.84□□□□□ -0.67
TUBB3-202ENST00000553656 C15orf61A6NNL5 157 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 H3BUA1 57 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 PLXNB1O43157 2135 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 IGKV1-5P01602 117 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
TUBB3-202ENST00000553656 IL6RP08887 468 aaPredicted RBP10.83□□□□□ -0.68
TUBB3-202ENST00000553656 OR9G9P0C7N8 305 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 RPL23AP62750 156 aaKnown RBP10.83□□□□□ -0.68
TUBB3-202ENST00000553656 TMEM187Q14656 261 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 FAM219AQ8IW50 185 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 SELENOHQ8IZQ5 122 aaKnown RBP10.83□□□□□ -0.68
TUBB3-202ENST00000553656 RNF152Q8N8N0 203 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 OR4F17Q8NGA8 305 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 OR5B3Q8NH48 314 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 ENKURQ8TC29 256 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 CASTOR1Q8WTX7 329 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 IL22RA2Q969J5 263 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 TMEM56Q96MV1 263 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 OR4F4Q96R69 305 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 SRSF8Q9BRL6 282 aaKnown RBP10.83□□□□□ -0.68
TUBB3-202ENST00000553656 PDCD10Q9BUL8 212 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 HINT2Q9BX68 163 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 C20orf85Q9H1P6 137 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 SLA2Q9H6Q3 261 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 TBC1D24Q9ULP9 559 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 TMEM56-RWDD3S4R434 201 aa10.83□□□□□ -0.68
TUBB3-202ENST00000553656 TENM1Q9UKZ4 2725 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 HMX3A6NHT5 357 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 SOX15O60248 233 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 SFT2D2O95562 160 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 DHFRP00374 187 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 TRGV3P03979 118 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 TCRBP04435 133 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 TRAPPC2P0DI81 140 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 TRAPPC2BP0DI82 140 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 MYOD1P15172 320 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 SLC6A1P30531 599 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 RAB9AP51151 201 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 MECP2P51608 486 aaKnown RBP10.82□□□□□ -0.68
TUBB3-202ENST00000553656 TPPP2P59282 170 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 SUPT4H1P63272 117 aaKnown RBP10.82□□□□□ -0.68
TUBB3-202ENST00000553656 PPP1R1AQ13522 171 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 C4orf46Q504U0 113 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 LCNL1Q6ZST4 164 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 HSD17B13Q7Z5P4 300 aaPredicted RBP10.82□□□□□ -0.68
TUBB3-202ENST00000553656 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 FAM110DQ8TAY7 271 aaPredicted RBP10.82□□□□□ -0.68
TUBB3-202ENST00000553656 MS4A10Q96PG2 267 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 FLVCR2Q9UPI3 526 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
TUBB3-202ENST00000553656 TRAV6A0A075B6T7 132 aa10.81□□□□□ -0.68
TUBB3-202ENST00000553656 A0A0B4J2A0 478 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms