RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 STHQ8IWL8 128 aa9.9□□□□□ -0.82
PRPF39-204ENST00000553605 BSCL2Q96G97 398 aaPredicted RBP9.9□□□□□ -0.82
PRPF39-204ENST00000553605 CENPNQ96H22 339 aaPredicted RBP9.9□□□□□ -0.82
PRPF39-204ENST00000553605 CMTM3Q96MX0 182 aa9.9□□□□□ -0.82
PRPF39-204ENST00000553605 LPAR5Q9H1C0 372 aa9.9□□□□□ -0.82
PRPF39-204ENST00000553605 HSF4Q9ULV5 492 aa9.9□□□□□ -0.82
PRPF39-204ENST00000553605 RAB27BO00194 218 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 CELP19835 753 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 CRHBPP24387 322 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 DCKP27707 260 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 DEFB131AP59861 70 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 PAFAH1B2P68402 229 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 QRFPP83859 136 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 OR2B11Q5JQS5 317 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 C1orf100Q5SVJ3 147 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 TTC23Q5W5X9 447 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 SPSB3Q6PJ21 355 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 PUSL1Q8N0Z8 303 aaKnown RBP9.89□□□□□ -0.83
PRPF39-204ENST00000553605 TMEM116Q8NCL8 245 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 VN1R17PQ8TDU5 208 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 CABLES2Q9BTV7 478 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 SMPD3Q9NY59 655 aaPredicted RBP9.89□□□□□ -0.83
PRPF39-204ENST00000553605 TBC1D24Q9ULP9 559 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 PRELID3BQ9Y3B1 194 aa9.89□□□□□ -0.83
PRPF39-204ENST00000553605 IGHV7-4-1A0A0J9YVY3 117 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 DFFBO76075 338 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 TMEM50BP56557 158 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 FAM89BQ8N5H3 189 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 ARHGAP5-AS1Q96IT6 56 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 FAM210BQ96KR6 192 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 URM1Q9BTM9 101 aaKnown RBP9.88□□□□□ -0.83
PRPF39-204ENST00000553605 CLEC2DQ9UHP7 191 aa9.88□□□□□ -0.83
PRPF39-204ENST00000553605 MRPS7Q9Y2R9 242 aaKnown RBP9.88□□□□□ -0.83
PRPF39-204ENST00000553605 IGHV3-49A0A0A0MS15 119 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 PNMA8CA0A1B0GUJ8 204 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 FOXI3A8MTJ6 420 aaPredicted RBP9.87□□□□□ -0.83
PRPF39-204ENST00000553605 BPNT1O95861 308 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 RPL8P62917 257 aaKnown RBP9.87□□□□□ -0.83
PRPF39-204ENST00000553605 GNGT1P63211 74 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 MORN3Q6PF18 240 aaPredicted RBP9.87□□□□□ -0.83
PRPF39-204ENST00000553605 KCTD9Q7L273 389 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 GIMAP1Q8WWP7 306 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 GINS4Q9BRT9 223 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 PECRQ9BY49 303 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 TMEM14BQ9NUH8 114 aa9.87□□□□□ -0.83
PRPF39-204ENST00000553605 EI24O14681 340 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 DIRAS3O95661 229 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 SPP1P10451 314 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 HLA-GP17693 338 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 MYL12AP19105 171 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 MAPK3P27361 379 aaPredicted RBP9.86□□□□□ -0.83
PRPF39-204ENST00000553605 RPL30P62888 115 aaKnown RBP9.86□□□□□ -0.83
PRPF39-204ENST00000553605 PLA2G7Q13093 441 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
PRPF39-204ENST00000553605 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 APH1BQ8WW43 257 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 RNF167Q9H6Y7 350 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 CLEC5AQ9NY25 188 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 AGRNO00468 2067 aa9.86□□□□□ -0.83
PRPF39-204ENST00000553605 MYCBP2O75592 4640 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 IGLC7A0M8Q6 106 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 DNASE2O00115 360 aaPredicted RBP9.85□□□□□ -0.83
PRPF39-204ENST00000553605 CYB5BO43169 146 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 C4BPBP20851 252 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 MRPS15P82914 257 aaKnown RBP9.85□□□□□ -0.83
PRPF39-204ENST00000553605 SMN1Q16637 294 aaKnown RBP9.85□□□□□ -0.83
PRPF39-204ENST00000553605 TCF24Q7RTU0 167 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 LRRTM1Q86UE6 522 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 CSNK1G2-AS1Q8NCQ2 148 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 OR4S2Q8NH73 311 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 ATP6V0BQ99437 205 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 NACAE9PAV3 2078 aa9.85□□□□□ -0.83
PRPF39-204ENST00000553605 IGHV3OR16-13A0A075B7E8 117 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 IGHV3-74A0A0B4J1X5 117 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 J3QRK9 145 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 CDK1P06493 297 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 OR2B8PP59922 312 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 PLAC9Q5JTB6 97 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 H1FOOQ8IZA3 346 aaPredicted RBP9.84□□□□□ -0.83
PRPF39-204ENST00000553605 FAM24BQ8N5W8 94 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 UBAC2Q8NBM4 344 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 ZNF485Q8NCK3 441 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
PRPF39-204ENST00000553605 DIMT1Q9UNQ2 313 aaKnown RBP9.84□□□□□ -0.83
PRPF39-204ENST00000553605 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
PRPF39-204ENST00000553605 TRAV14DV4A0A0A6YYC5 116 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 IGHV3-21A0A0B4J1V1 117 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 F8W735 103 aaPredicted RBP9.83□□□□□ -0.84
PRPF39-204ENST00000553605 YIF1AO95070 293 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 HRASP01112 189 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 CD5P06127 495 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 FCGR3AP08637 254 aa9.83□□□□□ -0.84
PRPF39-204ENST00000553605 CD36P16671 472 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms