RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 FOXJ2Q9P0K8 574 aa4.34□□□□□ -1.71
TMEM55B-204ENST00000553602 SPRR3Q9UBC9 169 aa4.34□□□□□ -1.71
TMEM55B-204ENST00000553602 PRNDQ9UKY0 176 aa4.34□□□□□ -1.71
TMEM55B-204ENST00000553602 SLC45A2Q9UMX9 530 aa4.34□□□□□ -1.71
TMEM55B-204ENST00000553602 PSG11Q9UQ72 335 aa4.34□□□□□ -1.71
TMEM55B-204ENST00000553602 TCF19Q9Y242 345 aa4.34□□□□□ -1.71
TMEM55B-204ENST00000553602 RTTNQ86VV8 2226 aa4.34□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF318Q5VUA4 2279 aa4.34□□□□□ -1.72
TMEM55B-204ENST00000553602 A0A0C4DFX4 3053 aa4.34□□□□□ -1.72
TMEM55B-204ENST00000553602 PTPRBP23467 1997 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 TRAV38-1A0A0B4J264 116 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 SCO2A0A1W2PP80 73 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF705GA8MUZ8 300 aaPredicted RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 ISLRO14498 428 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 HMGB3O15347 200 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 FCGR3BO75015 233 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 PROP1O75360 226 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 RBMXL2O75526 392 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 HLA-DQA1P01909 254 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 THBDP07204 575 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 GRPP07492 148 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 IL6RP08887 468 aaPredicted RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 OR5G3P0C626 314 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 RNF224P0DH78 156 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CGB3P0DN86 165 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CGB7P0DN87 165 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CRISP2P16562 243 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 GCH1P30793 250 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 PRDX2P32119 198 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 ADMP35318 185 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 GATA4P43694 442 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 LINC00310P59036 64 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 TAS2R45P59539 299 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 HSPE1P61604 102 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 RPL31P62899 125 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CX3CL1P78423 397 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 USF2Q15853 346 aaPredicted RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 RPEL1Q2QD12 228 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 ALKBH6Q3KRA9 238 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CST9LP1Q5W188 147 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CYB5R2Q6BCY4 276 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 FAM180AQ6UWF9 173 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 Q6ZR03 302 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 TGIF2LXQ8IUE1 241 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 C1orf210Q8IVY1 113 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 GCNT2Q8N0V5 402 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF114Q8NC26 417 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 WIPF2Q8TF74 440 aaPredicted RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 SMIM12Q96EX1 92 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 GUCD1Q96NT3 240 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 S1PR3Q99500 378 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 MIEN1Q9BRT3 115 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 DERL1Q9BUN8 251 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 SNHG12Q9BXW3 62 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 COMMD5Q9GZQ3 224 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 FAM234AQ9H0X4 552 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 HEYLQ9NQ87 328 aaPredicted RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 TMEM140Q9NV12 185 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF586Q9NXT0 402 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 MRPL27Q9P0M9 148 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 GNG12Q9UBI6 72 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 DKK4Q9UBT3 224 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 IL19Q9UHD0 177 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 YTHDF2Q9Y5A9 579 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 SDK2Q58EX2 2172 aa4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CHD3Q12873 2000 aaKnown RBP4.33□□□□□ -1.72
TMEM55B-204ENST00000553602 CACNA1GO43497 2377 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 DOCK10Q96BY6 2186 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 IGKV1D-17A0A075B6S4 117 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 IGHV2OR16-5A0A0B4J2B6 119 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 A0A1W2PNU3 283 aaPredicted RBP4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 C20orf202A1L168 122 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 M0R1X1 148 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 RRHO14718 337 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 WNT9BO14905 357 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 CRYAAP02489 173 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 SNRPCP09234 159 aaKnown RBP4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 OR4A8P0C604 315 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 LINC00614P0C842 121 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 CECR9P0C854 216 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 BRS3P32247 399 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 CEBPDP49716 269 aaPredicted RBP4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 EDDM3BP56851 147 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 PRCDQ00LT1 54 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 ZNF90Q03938 601 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 C3AR1Q16581 482 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 C2orf83Q53S99 150 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 GCSAMLQ5JQS6 135 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 MIC13Q5XKP0 118 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 IGFL2Q6UWQ7 119 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 LINC00696Q6ZRV3 163 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 FAM231DQ6ZW35 169 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 Q6ZWC4 215 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 MED12LQ86YW9 2145 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 MMD2Q8IY49 270 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 TMEM256Q8N2U0 113 aa4.32□□□□□ -1.72
TMEM55B-204ENST00000553602 CD177Q8N6Q3 437 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms