RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 JPT1Q9UK76 154 aa3.69□□□□□ -1.82
ATXN3-222ENST00000553570 SPATA2Q9UM82 520 aa3.69□□□□□ -1.82
ATXN3-222ENST00000553570 KCNK7Q9Y2U2 307 aa3.69□□□□□ -1.82
ATXN3-222ENST00000553570 TMED3Q9Y3Q3 217 aa3.69□□□□□ -1.82
ATXN3-222ENST00000553570 ETV7Q9Y603 341 aa3.69□□□□□ -1.82
ATXN3-222ENST00000553570 IGKV1D-8A0A087WSZ0 117 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 TRBV6-6A0A0A6YYG2 114 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 IFITM10A6NMD0 228 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 FOXI3A8MTJ6 420 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 MFNGO00587 321 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 TXNL1O43396 289 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 LANCL1O43813 399 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 OR2F2O95006 317 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 CNIH1O95406 144 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 DIRAS3O95661 229 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 EIF4EP06730 217 aaKnown RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 CD28P10747 220 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ELK1P19419 428 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 CNTFRP26992 372 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 CD1BP29016 333 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 RPL5P46777 297 aaKnown RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 DYNLT3P51808 116 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 LUMP51884 338 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 FXYD4P59646 89 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 KRTAP10-3P60369 221 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 TSPAN5P62079 268 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 GNB1P62873 340 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 PAX5Q02548 391 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF816Q0VGE8 651 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 CBX3Q13185 183 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 HERPUD1Q15011 391 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 MMDQ15546 238 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 Q3ZCU0 254 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 OR2B11Q5JQS5 317 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF880Q6PDB4 577 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 FAM131AQ6UXB0 335 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 SLC35E3Q7Z769 313 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF554Q86TJ5 538 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF329Q86UD4 541 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 GAPTQ8N292 157 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 GVQW1Q8N7I0 195 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 MAPKAPK5-AS1Q8N8E1 139 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF439Q8NDP4 499 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ACOT12Q8WYK0 555 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 AP3S1Q92572 193 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 SLC25A46Q96AG3 418 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 NOL4LQ96MY1 436 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 MRPL20Q9BYC9 149 aaKnown RBP3.68□□□□□ -1.82
ATXN3-222ENST00000553570 OR2D2Q9H210 308 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 AUNIPQ9H7T9 357 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 Q9H8V8 135 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF702PQ9H963 129 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 ZNF355PQ9NSJ1 428 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 WDR83OSQ9Y284 106 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 MOB4Q9Y3A3 225 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
ATXN3-222ENST00000553570 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 TRBV6-7A0A0A0MS04 114 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 IGKV1-6A0A0C4DH72 117 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 PSMB11A5LHX3 300 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 TRIM64CA6NLI5 447 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 M0QZK8 103 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 TNFSF12O43508 249 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SSX5O60225 188 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 TSHBP01222 138 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 APOA2P02652 100 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 CTXN2P0C2S0 81 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 CT45A6P0DMU7 189 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 CT45A5P0DMU8 189 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 CT45A7P0DMV0 189 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 DTYMKP23919 212 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 HLA-DMAP28067 261 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 FCGR2CP31995 323 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 CBX5P45973 191 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 ALDH3B2P48448 385 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 TAS2R20P59543 309 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 ACTBP60709 375 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 HERV-K104P61576 105 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SLC35B1P78383 322 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 DLK1P80370 383 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SPCS2Q15005 226 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-222ENST00000553570 CNIH2Q6PI25 160 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 Q6ZTC4 211 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SMIM29Q86T20 159 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 C8orf31Q8N9H6 132 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 OR5H2Q8NGV7 314 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SGMS2Q8NHU3 365 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 FCAMRQ8WWV6 532 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 ST6GALNAC6Q969X2 333 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 FLYWCH2Q96CP2 140 aaKnown RBP3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SLC25A38Q96DW6 304 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 DIRAS2Q96HU8 199 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 NABP2Q9BQ15 211 aa3.67□□□□□ -1.82
ATXN3-222ENST00000553570 C6orf62Q9GZU0 229 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-222ENST00000553570 SLC5A7Q9GZV3 580 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms