RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 TREM1Q9NP99 234 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 FBXO7Q9Y3I1 522 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 RFNGQ9Y644 331 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 LRRK2Q5S007 2527 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 IGHV3-72A0A0B4J1Y9 119 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 SMCO3A2RU48 225 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 C15orf61A6NNL5 157 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 C22orf46C9J442 243 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 OR8U8P0C7N1 319 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 PCP4P48539 62 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 FHITP49789 147 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 PNKDQ8N490 385 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 ATG101Q9BSB4 218 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 MMP26Q9NRE1 261 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 TCF19Q9Y242 345 aa6.74□□□□□ -1.33
RAB5B-210ENST00000553116 LOC105371242A0A075B767 164 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 TMEM238LA0A1B0GVL6 79 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 H0YJW9 148 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 FGF2P09038 288 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 IGFBP2P18065 325 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 NPBWR1P48145 328 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 RAB5CP51148 216 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
RAB5B-210ENST00000553116 FABP9Q0Z7S8 132 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 TMEM14EPQ6UXP3 125 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 LINC00311Q8N616 119 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 ZNF525Q8N782 197 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 LHX4Q969G2 390 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 ISOC2Q96AB3 205 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 RPEQ96AT9 228 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 PINX1Q96BK5 328 aaKnown RBP6.73□□□□□ -1.33
RAB5B-210ENST00000553116 RSG1Q9BU20 258 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 PARP11Q9NR21 331 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 CACFD1Q9UGQ2 172 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 OR51B2Q9Y5P1 312 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 IFNA4P05014 189 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 SAA1P0DJI8 122 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-210ENST00000553116 GPX4P36969 197 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-210ENST00000553116 DEFA6Q01524 100 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 MOB3BQ86TA1 216 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 HAPLN4Q86UW8 402 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 OR4C13Q8NGP0 309 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 OSR1Q8TAX0 266 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-210ENST00000553116 CCL19Q99731 98 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 PRNDQ9UKY0 176 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 WASHC3Q9Y3C0 194 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 HLA-DRB5Q30154 266 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 FAM71F2Q6NXP2 309 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 IL34Q6ZMJ4 242 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 PDPNQ86YL7 162 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 C8orf31Q8N9H6 132 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 ZNF596Q8TC21 504 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 NABP2Q9BQ15 211 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 C20orf24Q9BUV8 137 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 PLEKHA3Q9HB20 300 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 FAM96BQ9Y3D0 163 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 AMMECR1Q9Y4X0 333 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-210ENST00000553116 INSIG2Q9Y5U4 225 aa6.73□□□□□ -1.33
RAB5B-210ENST00000553116 A0A087X0M5 115 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 A0A1B0GX30 115 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 A8MXK9 166 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 UMAD1C9J7I0 102 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 MYOD1P15172 320 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 ELLP55199 621 aaPredicted RBP6.72□□□□□ -1.33
RAB5B-210ENST00000553116 RAB11AP62491 216 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 PJVKQ0ZLH3 352 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 C11orf42Q8N5U0 333 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 TNFRSF14Q92956 283 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 TMEM147Q9BVK8 224 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 COMMD5Q9GZQ3 224 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 ASH1LQ9NR48 2969 aaKnown RBP6.72□□□□□ -1.33
RAB5B-210ENST00000553116 UTP20O75691 2785 aaKnown RBP6.72□□□□□ -1.33
RAB5B-210ENST00000553116 A0A1W2PRD5 423 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 A0A1W2PRF3 423 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 A0A1W2PRM7 423 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 SRRM4A7MD48 611 aaKnown RBP6.72□□□□□ -1.33
RAB5B-210ENST00000553116 ARG1P05089 322 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 FGF7P21781 194 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 HSPE1P61604 102 aaKnown RBP6.72□□□□□ -1.33
RAB5B-210ENST00000553116 ZNF429Q86V71 674 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 ZNF843Q8N446 348 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 ZNF709Q8N972 641 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 OR5AN1Q8NGI8 311 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 OR52E5Q8NH55 327 aa6.72□□□□□ -1.33
RAB5B-210ENST00000553116 FOXA2Q9Y261 457 aaPredicted RBP6.72□□□□□ -1.33
RAB5B-210ENST00000553116 NUDT19A8MXV4 375 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 KBTBD11O94819 623 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 MC5RP33032 325 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 LCN2P80188 198 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 ATP6V1FQ16864 119 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 VMA21Q3ZAQ7 101 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 TM4SF20Q53R12 229 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 VSTM2AQ8TAG5 236 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 C8orf46Q8TAG6 207 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 BPESC1Q9GZL8 116 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 FKBP11Q9NYL4 201 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 PLXNB1O43157 2135 aa6.71□□□□□ -1.33
RAB5B-210ENST00000553116 A1L4Q6 167 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms