RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 HRASLSQ9HDD0 168 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 BIRC6Q9NR09 4857 aa8.61□□□□□ -1.03
NEK3-204ENST00000552973 DNAH1Q9P2D7 4330 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 SULT1C2O00338 296 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 DHFRP00374 187 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 RPA2P15927 270 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 SDC2P34741 201 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 FXYD4P59646 89 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 FAM209BQ5JX69 171 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 OR4A47Q6IF82 309 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 ZNF773Q6PK81 442 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 BTNL8Q6UX41 500 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 UNQ9165/PRO28630Q6UXU0 137 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 SLC16A13Q7RTY0 426 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 TPRA1Q86W33 373 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 BEST4Q8NFU0 473 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 OR13F1Q8NGS4 319 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 IL17DQ8TAD2 202 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 RHBDL2Q9NX52 303 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 RAB26Q9ULW5 256 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 SSR3Q9UNL2 185 aa8.6□□□□□ -1.03
NEK3-204ENST00000552973 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 MEIS3P1A6NDR6 274 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 SCGNO76038 276 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 HIST1H1BP16401 226 aaKnown RBP8.59□□□□□ -1.03
NEK3-204ENST00000552973 GPR183P32249 361 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 OR2B8PP59922 312 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 GABARAPL2P60520 117 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 TIMM50Q3ZCQ8 353 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 ZNF585BQ52M93 769 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 IDNKQ5T6J7 187 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 SLC5A7Q9GZV3 580 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 HYDINQ4G0P3 5121 aa8.59□□□□□ -1.03
NEK3-204ENST00000552973 LOC102724200A0A096LPH7 203 aaPredicted RBP8.58□□□□□ -1.04
NEK3-204ENST00000552973 UPK2O00526 184 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 MRPS14O60783 128 aaKnown RBP8.58□□□□□ -1.04
NEK3-204ENST00000552973 PPYP01298 95 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 PLET1Q6UQ28 207 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 OR10W1Q8NGF6 305 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 OR4A5Q8NH83 315 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 ZNF502Q8TBZ5 544 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 SLC25A38Q96DW6 304 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 OVOL2Q9BRP0 275 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 GGTLC1Q9BX51 225 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 BET1LQ9NYM9 111 aa8.58□□□□□ -1.04
NEK3-204ENST00000552973 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 IGHV3-21A0A0B4J1V1 117 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 LOC100506127A0A0U1RQW1 187 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 IGLC7A0M8Q6 106 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 S1PR2O95136 353 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 HPRT1P00492 218 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 CATR1Q13166 79 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 KLK9Q2XQG4 91 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 AADACL3Q5VUY0 350 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 ZNF818PQ6ZRF7 136 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 RBPMS2Q6ZRY4 209 aaKnown RBP8.57□□□□□ -1.04
NEK3-204ENST00000552973 TMEM17Q86X19 198 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 ZBTB34Q8NCN2 500 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 DMBX1Q8NFW5 382 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 CXorf58Q96LI9 332 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 COMMD5Q9GZQ3 224 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 TMEM140Q9NV12 185 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 UBQLN2Q9UHD9 624 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 KLK9Q9UKQ9 250 aa8.57□□□□□ -1.04
NEK3-204ENST00000552973 TNCP24821 2201 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 A8MWP6 167 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 NQO2P16083 231 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 TAS2R31P59538 309 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 ANKRD55Q3KP44 614 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 SLC25A24Q6NUK1 477 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 OR1L6Q8NGR2 347 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 FCGR1BQ92637 280 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 AIFM2Q9BRQ8 373 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 AUNIPQ9H7T9 357 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 DIABLOQ9NR28 239 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 MRPL27Q9P0M9 148 aaKnown RBP8.56□□□□□ -1.04
NEK3-204ENST00000552973 ETV7Q9Y603 341 aa8.56□□□□□ -1.04
NEK3-204ENST00000552973 IGHV3OR16-8A0A075B7F1 116 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 TEX50A0A1B0GTY4 177 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 OR2T8A6NH00 312 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 RBFOX2O43251 390 aaKnown RBP eCLIP8.55□□□□□ -1.04
NEK3-204ENST00000552973 TGOLN2O43493 480 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 C8orf88P0DMB2 117 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 OR13C7P0DN81 318 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.048e-14■■■□□ 15
NEK3-204ENST00000552973 MSMO1Q15800 293 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 OR5AP2Q8NGF4 316 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 MARC2Q969Z3 335 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
NEK3-204ENST00000552973 THYN1Q9P016 225 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 NSG2Q9Y328 171 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 UFC1Q9Y3C8 167 aa8.55□□□□□ -1.04
NEK3-204ENST00000552973 TRAV25A0A0B4J276 109 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 A0A0J9YWU9 116 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms