RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 LINC00299Q6ZSB3 139 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 C8orf86Q6ZUL3 223 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF491Q8N8L2 437 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 VSIG4Q9Y279 399 aa9.12□□□□□ -0.95
TRAFD1-209ENST00000552896 C3orf85A0A1B0GTC6 90 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 TEX22C9J3V5 150 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 UPK2O00526 184 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 OR9G9P0C7N8 305 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 G6PCP35575 357 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 TPPP2P59282 170 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF45Q02386 682 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 KIAA0141Q14154 515 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 CNPY1Q3B7I2 92 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 TRIQKQ629K1 86 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 THOC7Q6I9Y2 204 aaKnown RBP9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 SLC25A42Q86VD7 318 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 ADAD2Q8NCV1 583 aaKnown RBP9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 RAX2Q96IS3 184 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 SEC22AQ96IW7 307 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 SCGB3A2Q96PL1 93 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 TP53RKQ96S44 253 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 TSC22D3Q99576 134 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 C5orf66Q9H5L9 145 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 BATF3Q9NR55 127 aa9.11□□□□□ -0.95
TRAFD1-209ENST00000552896 A0A1B0GW64 132 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 CRYM-AS1A6NIL9 109 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 NPIPB5A8MRT5 1133 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 I3L521 148 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 KRASP01116 189 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 IGKV1-39P01597 117 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 TRGV3P03979 118 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 IGKV1D-39P04432 117 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 APELAP0DMC3 54 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 UCP1P25874 307 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 MYCNOSP40205 109 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 INPP1P49441 399 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 OR2B8PP59922 312 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 FHL3Q13643 280 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF57Q68EA5 555 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 TTC9CQ8N5M4 171 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 LINC00482Q8N8I6 264 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 CASTOR1Q8WTX7 329 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 P2RX4Q99571 388 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 SDHCQ99643 169 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 SRSF8Q9BRL6 282 aaKnown RBP9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 RTBDNQ9BSG5 229 aaPredicted RBP9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 COMMD5Q9GZQ3 224 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 NAA60Q9H7X0 242 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 GNB4Q9HAV0 340 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 AKIP1Q9NQ31 210 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 COA4Q9NYJ1 87 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 PTTG2Q9NZH5 202 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 GPR132Q9UNW8 380 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF257Q9Y2Q1 563 aa9.1□□□□□ -0.95
TRAFD1-209ENST00000552896 DNAH3Q8TD57 4116 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 TRAV3A0A0B4J244 114 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 C15orf61A6NNL5 157 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 CCL24O00175 119 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 ATG12O94817 140 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 LGALS1P09382 135 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 CD33P20138 364 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 BAK1Q16611 211 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 DEFB136Q30KP8 78 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 OR5T1Q8NG75 326 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 FYTTD1Q96QD9 318 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 QTRT1Q9BXR0 403 aaKnown RBP9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 TMEM222Q9H0R3 208 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 ZNF355PQ9NSJ1 428 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 TMEM14BQ9NUH8 114 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 PRNDQ9UKY0 176 aa9.09□□□□□ -0.95
TRAFD1-209ENST00000552896 A0A0G2JLM5 398 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 IGLC7A0M8Q6 106 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 NAP1L6A6NFF2 107 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 HMX3A6NHT5 357 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 CGB1A6NKQ9 187 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 FAM223BA6NKX1 122 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 E7EUB6 86 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 SNAPC5O75971 98 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 OR5AC1P0C628 307 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 P0C879 139 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 IL7P13232 177 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 MYOD1P15172 320 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 AKR1C2P52895 323 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 H2BFWTQ7Z2G1 175 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 HSD17B13Q7Z5P4 300 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 FAM223AQ8IWN6 122 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 WFDC9Q8NEX5 89 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 OR1L8Q8NGR8 309 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 OR5B3Q8NH48 314 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 TMEM230Q96A57 120 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 RCC1LQ96I51 464 aaKnown RBP9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 USMG5Q96IX5 58 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 MS4A10Q96PG2 267 aa9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 SLC25A21Q9BQT8 299 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-209ENST00000552896 FKBP11Q9NYL4 201 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms