RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TRAPPC2BP0DI82 140 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 IGHV4-30-4P0DP06 118 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 KIR2DS2P43631 304 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 CATR1Q13166 79 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 ASAH1Q13510 395 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 ZNF562Q6V9R5 426 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 ZNF818PQ6ZRF7 136 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 PPP1R27Q86WC6 154 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 CMTM1Q8IZ96 169 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 ARRDC1Q8N5I2 433 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 OSR1Q8TAX0 266 aaPredicted RBP9.08□□□□□ -0.96
CKAP4-202ENST00000552828 CASTOR1Q8WTX7 329 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 OR4C12Q96R67 309 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 TINAGL1Q9GZM7 467 aaPredicted RBP9.08□□□□□ -0.96
CKAP4-202ENST00000552828 SRRQ9GZT4 340 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 SLA2Q9H6Q3 261 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 HYDINQ4G0P3 5121 aa9.08□□□□□ -0.96
CKAP4-202ENST00000552828 SRRM4A7MD48 611 aaKnown RBP9.07□□□□□ -0.96
CKAP4-202ENST00000552828 GPR31O00270 319 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 RAB3DO95716 219 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 IGLV2-23P01705 113 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 CD74P04233 296 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 S100GP29377 79 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 MEF2DQ14814 521 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 VMA21Q3ZAQ7 101 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 OR2B11Q5JQS5 317 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 STEAP1BQ6NZ63 245 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 OR4S2Q8NH73 311 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 CLCC1Q96S66 551 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 GPHA2Q96T91 129 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 ELOVL1Q9BW60 279 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 FXYD6Q9H0Q3 95 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 TBC1D24Q9ULP9 559 aa9.07□□□□□ -0.96
CKAP4-202ENST00000552828 PLECQ15149 4684 aaKnown RBP9.06□□□□□ -0.96
CKAP4-202ENST00000552828 RBFOX2O43251 390 aaKnown RBP eCLIP9.06□□□□□ -0.96
CKAP4-202ENST00000552828 PGLYRP1O75594 196 aaPredicted RBP9.06□□□□□ -0.96
CKAP4-202ENST00000552828 CRYGBP07316 175 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 UCP3P55916 312 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 UBE2KP61086 200 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 ZNF79Q15937 498 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 PYDC2Q56P42 97 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 AADACL3Q5VUY0 350 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 ZFAND6Q6FIF0 208 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 UNQ5815/PRO19632Q6UWF5 114 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 SLC38A6Q8IZM9 456 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 SPAG16Q8N0X2 631 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 TEX45Q8NA69 505 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 LFNGQ8NES3 379 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 CD300LFQ8TDQ1 290 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 ABHD5Q8WTS1 349 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 MS4A10Q96PG2 267 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 AIFM2Q9BRQ8 373 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 THAP7Q9BT49 309 aaPredicted RBP9.06□□□□□ -0.96
CKAP4-202ENST00000552828 RSRP1Q9BUV0 290 aa9.06□□□□□ -0.96
CKAP4-202ENST00000552828 DISC1C4P0D8 188 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 CNIH1O95406 144 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 BRI3O95415 125 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 CA2P00918 260 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 HRASP01112 189 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 AKAIN1P0CW23 69 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 IL7P13232 177 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 BRWD1-AS2P59051 145 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 TPPP2P59282 170 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 CD300CQ08708 224 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 KLF5Q13887 457 aaPredicted RBP9.05□□□□□ -0.96
CKAP4-202ENST00000552828 IL34Q6ZMJ4 242 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 LHFPL1Q86WI0 220 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 SGPP2Q8IWX5 399 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 Q8N402 240 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 OR4D10Q8NGI6 311 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 OR51H1Q8NH63 302 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 TERB2Q8NHR7 220 aa9.05□□□□□ -0.96
CKAP4-202ENST00000552828 FAM103A1Q9BTL3 118 aaKnown RBP9.05□□□□□ -0.96
CKAP4-202ENST00000552828 RANGRFQ9HD47 186 aaPredicted RBP9.05□□□□□ -0.96
CKAP4-202ENST00000552828 ANKRD20A5PA0PJZ0 165 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 H3BUA1 57 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 CREBL2O60519 120 aaPredicted RBP9.04□□□□□ -0.96
CKAP4-202ENST00000552828 HPRT1P00492 218 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 TRGV3P03979 118 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 RLN1P04808 185 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 SAA1P0DJI8 122 aaPredicted RBP9.04□□□□□ -0.96
CKAP4-202ENST00000552828 PGAM2P15259 253 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 ZP3P21754 424 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 PJVKQ0ZLH3 352 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 FXYD3Q14802 87 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 PRSS8Q16651 343 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 SCGB2B2Q4G0G5 96 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 PHLDA2Q53GA4 152 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 VSTM2AQ8TAG5 236 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 ZNF486Q96H40 463 aaPredicted RBP9.04□□□□□ -0.96
CKAP4-202ENST00000552828 SPATA25Q9BR10 227 aa9.04□□□□□ -0.96
CKAP4-202ENST00000552828 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 ACTL6BO94805 426 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 OR2A4O95047 310 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 ZNF735P0CB33 412 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 F2RP25116 425 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 TAS2R31P59538 309 aa9.03□□□□□ -0.96
CKAP4-202ENST00000552828 AP3S2P59780 193 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms