RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	SLC7A5P1	Q8MH63	180 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	LILRB2	Q8N423	598 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	LRRC20	Q8TCA0	184 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	TMED6	Q8WW62	240 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	MBD6	Q96DN6	1003 aa		10.21	□□□□□ -0.77
CACNB3-223	ENST00000552480	MYO18B	Q8IUG5	2567 aa		10.21	□□□□□ -0.78
CACNB3-223	ENST00000552480	DCHS2	Q6V1P9	2916 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	PMS2P5	A8MQ11	134 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480		B4DSR2	109 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	IFNA5	P01569	189 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	SEC11B	P0C7V7	166 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	MYOD1	P15172	320 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	ATP6V1F	Q16864	119 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR8G2P	Q6IF36	304 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	THNSL2	Q86YJ6	484 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR1L8	Q8NGR8	309 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	PCNP	Q8WW12	178 aa	Known RBP	10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	PINX1	Q96BK5	328 aa	Known RBP	10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	MALSU1	Q96EH3	234 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	COMMD5	Q9GZQ3	224 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	ZNF430	Q9H8G1	570 aa	Predicted RBP	10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	PLEKHA3	Q9HB20	300 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	NDUFA4L2	Q9NRX3	87 aa		10.2	□□□□□ -0.78
CACNB3-223	ENST00000552480	TRAV20	A0A0B4J274	112 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	CENPVL3	A0A0U1RRI6	287 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	INS-IGF2	F8WCM5	200 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	NPFF	O15130	113 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	FGF16	O43320	207 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	MOS	P00540	346 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	IFNA10	P01566	189 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR8U8	P0C7N1	319 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	SPP1	P10451	314 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	CNTFR	P26992	372 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	MAS1L	P35410	378 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	RAB11A	P62491	216 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	LOXL1	Q08397	574 aa	Predicted RBP	10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	SSX2	Q16385	188 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	PRSS8	Q16651	343 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	MRGPRG-AS1	Q2M3A8	158 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	MMD2	Q8IY49	270 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	DYNAP	Q8N1N2	210 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	HSD17B11	Q8NBQ5	300 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR10P1	Q8NGE3	313 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	RNF141	Q8WVD5	230 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	HINT2	Q9BX68	163 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	TPSG1	Q9NRR2	321 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	SIGLEC9	Q9Y336	463 aa		10.19	□□□□□ -0.78
CACNB3-223	ENST00000552480	ARHGAP32	A7KAX9	2087 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	SETX	Q7Z333	2677 aa	Known RBP	10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480		A0A1W2PN81	502 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	FBXO24	O75426	580 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	IGKV1D-33	P01593	117 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	IGKV1-33	P01594	117 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	SNRNP70	P08621	437 aa	Known RBP	10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	GATA3	P23771	443 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	SAA4	P35542	130 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	CHRNA7	P36544	502 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	SULT1A2	P50226	295 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	F2RL1	P55085	397 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	ATP5I	P56385	69 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	EBI3	Q14213	229 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480		Q5PR19	223 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	LINC01356	Q8N9X3	169 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	SLC24A4	Q8NFF2	622 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR2T10	Q8NGZ9	312 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	C17orf50	Q8WW18	174 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	AJUBA	Q96IF1	538 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	TMEM147	Q9BVK8	224 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	METTL1	Q9UBP6	276 aa	Known RBP	10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	AUP1	Q9Y679	476 aa		10.18	□□□□□ -0.78
CACNB3-223	ENST00000552480	IGHV1-69D	A0A0B4J2H0	117 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	RRH	O14718	337 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	NBR2	O15453	112 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	NDUFA3	O95167	84 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	IGHV1-69	P01742	117 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	OPN1MW	P04001	364 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	FAM157C	P0CG43	387 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	OPN1MW2	P0DN77	364 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	OPN1MW3	P0DN78	364 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	NPY1R	P25929	384 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	ATP6V0C	P27449	155 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	MMD	Q15546	238 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	VWC2	Q2TAL6	325 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	LRRC75B	Q2VPJ9	315 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	HIST2H2BC	Q6DN03	193 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	SLC25A24	Q6NUK1	477 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	PRSS57	Q6UWY2	283 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	ETV3L	Q6ZN32	361 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	NPB	Q8NG41	125 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	SCGB1C1	Q8TD33	95 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	TMEM170A	Q8WVE7	144 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	EAF1	Q96JC9	268 aa	Predicted RBP	10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	CXorf58	Q96LI9	332 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	GGACT	Q9BVM4	153 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	SH3BGRL3	Q9H299	93 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	UQCC1	Q9NVA1	299 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	MED9	Q9NWA0	146 aa		10.17	□□□□□ -0.78
CACNB3-223	ENST00000552480	KIAA1456	Q9P272	454 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms