RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, human

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-209	ENST00000552162	PRR20C	P86479	221 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	PRR20D	P86480	221 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	PRR20B	P86481	221 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	PRR20A	P86496	221 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	IRF3	Q14653	427 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	SSX1	Q16384	188 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	TMEM190	Q8WZ59	177 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	ZNF436	Q9C0F3	470 aa	Predicted RBP	12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	MAP6D1	Q9H9H5	199 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	ELF5	Q9UKW6	265 aa	Predicted RBP	12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	SPATA2	Q9UM82	520 aa		12.05	□□□□□ -0.48
RAB5C-209	ENST00000552162	IGKV1D-13	A0A0B4J2D9	117 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	CGB1	A6NKQ9	187 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	IGKV1-13	P0DP09	117 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	HLA-G	P17693	338 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	RAB6A	P20340	208 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	DTYMK	P23919	212 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	FABP5	Q01469	135 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	EIF4EBP1	Q13541	118 aa	Predicted RBP	12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	GALNT14	Q96FL9	552 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	DAZ1	Q9NQZ3	744 aa	Known RBP	12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	TAS2R8	Q9NYW2	309 aa		12.04	□□□□□ -0.48
RAB5C-209	ENST00000552162	OR4C46	A6NHA9	309 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	TGOLN2	O43493	480 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	HRAS	P01112	189 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	CTXN2	P0C2S0	81 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	OR10A3	P58181	314 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	NANOS2	P60321	138 aa	Known RBP	12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	LAMTOR1	Q6IAA8	161 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	OR5B3	Q8NH48	314 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	MFF	Q9GZY8	342 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	SCN3B	Q9NY72	215 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	FBXL17	Q9UF56	701 aa		12.03	□□□□□ -0.48
RAB5C-209	ENST00000552162	METTL21EP	A6NDL7	271 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	RPA2	P15927	270 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	PTBP1	P26599	531 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	OR2B8P	P59922	312 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	MLLT11	Q13015	90 aa	Predicted RBP	12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	RBMS2	Q15434	407 aa	Known RBP	12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	TIMM50	Q3ZCQ8	353 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	MFSD4A	Q8N468	514 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	OR4A5	Q8NH83	315 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	C11orf45	Q8TAV5	145 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	GPHA2	Q96T91	129 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	BET1L	Q9NYM9	111 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	THYN1	Q9P016	225 aa		12.02	□□□□□ -0.49
RAB5C-209	ENST00000552162	IGLC7	A0M8Q6	106 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	IFITM5	A6NNB3	132 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	IFNA4	P05014	189 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	ARL6IP1	Q15041	203 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	RCN1	Q15293	331 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	ZNF66	Q6ZN08	573 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	CD300LF	Q8TDQ1	290 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	RARRES2	Q99969	163 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	C11orf68	Q9H3H3	251 aa	Known RBP	12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	HRASLS	Q9HDD0	168 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	ACOT13	Q9NPJ3	140 aa		12.01	□□□□□ -0.49
RAB5C-209	ENST00000552162	OR2T8	A6NH00	312 aa		12	□□□□□ -0.49
RAB5C-209	ENST00000552162	PDCD5	O14737	125 aa		12	□□□□□ -0.49
RAB5C-209	ENST00000552162	OGFRL1	Q5TC84	451 aa	Predicted RBP	12	□□□□□ -0.49
RAB5C-209	ENST00000552162	APRG1	Q8IVJ8	170 aa		12	□□□□□ -0.49
RAB5C-209	ENST00000552162	VN1R17P	Q8TDU5	208 aa		12	□□□□□ -0.49
RAB5C-209	ENST00000552162	C2CD4C	Q8TF44	421 aa		12	□□□□□ -0.49
RAB5C-209	ENST00000552162	ATG5	Q9H1Y0	275 aa		12	□□□□□ -0.49
RAB5C-209	ENST00000552162	PKHD1	P08F94	4074 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	IGHV3OR16-8	A0A075B7F1	116 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	TNFSF12	O43508	249 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	CTSD	P07339	412 aa	Predicted RBP	11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	ZNF124	Q15973	351 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	CDNF	Q49AH0	187 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	HACD4	Q5VWC8	232 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	CNIH2	Q6PI25	160 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	NUDCD2	Q8WVJ2	157 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	BSCL2	Q96G97	398 aa	Predicted RBP	11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	C20orf24	Q9BUV8	137 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	COMMD5	Q9GZQ3	224 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	CSTL1	Q9H114	145 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	DCSTAMP	Q9H295	470 aa		11.99	□□□□□ -0.49
RAB5C-209	ENST00000552162	TRAV1-2	A0A0B4J238	106 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	TRAV3	A0A0B4J244	114 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	MPTX1	A8MV57	137 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	NDUFA4	O00483	81 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	CYB5B	O43169	146 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	ZNF207	O43670	478 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	TCTA	P57738	103 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	SPAG16	Q8N0X2	631 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	OR11H2	Q8NH07	326 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	MGLL	Q99685	303 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	SRSF8	Q9BRL6	282 aa	Known RBP	11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	AIFM2	Q9BRQ8	373 aa		11.98	□□□□□ -0.49
RAB5C-209	ENST00000552162	TMEM235	A6NFC5	223 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	RGS10	O43665	173 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	MYL9	P24844	172 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	SPSB3	Q6PJ21	355 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	GDPD1	Q8N9F7	314 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	OR10W1	Q8NGF6	305 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	SECTM1	Q8WVN6	248 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	CHRDL1	Q9BU40	450 aa		11.97	□□□□□ -0.49
RAB5C-209	ENST00000552162	QTRT1	Q9BXR0	403 aa	Known RBP	11.97	□□□□□ -0.49

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