RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 MLLT11Q13015 90 aaPredicted RBP0.86□□□□□ -2.27
SCAF11-215ENST00000551391 ELOBQ15370 118 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 DCXRQ7Z4W1 244 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 RPS19BP1Q86WX3 136 aaKnown RBP0.86□□□□□ -2.27
SCAF11-215ENST00000551391 TMEM156Q8N614 296 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 CXorf21Q9HAI6 301 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 NAT8Q9UHE5 227 aa0.86□□□□□ -2.27
SCAF11-215ENST00000551391 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 MYH11P35749 1972 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 IGKV3-7A0A075B6H7 116 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 LEPROTO15243 131 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 C1QAP02745 245 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 PPBPP02775 128 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 REG1AP05451 166 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 OCM2P0CE71 109 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 IL9P15248 144 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 RPL12P30050 165 aaKnown RBP0.85□□□□□ -2.27
SCAF11-215ENST00000551391 CCR7P32248 378 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 CSN1S1P47710 185 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 MAP3K7CLP57077 242 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 FAM151BQ6UXP7 276 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 HIST2H3AQ71DI3 136 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 ZNF550Q7Z398 422 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 COMMD7Q86VX2 200 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 TBC1D19Q8N5T2 526 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 C9orf163Q8N9P6 203 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 PIGXQ8TBF5 258 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 ROPN1LQ96C74 230 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 ADAT1Q9BUB4 502 aaKnown RBP0.85□□□□□ -2.27
SCAF11-215ENST00000551391 BRWD1Q9NSI6 2320 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 PXMP4Q9Y6I8 212 aa0.85□□□□□ -2.27
SCAF11-215ENST00000551391 TRAPPC2LH3BP13 241 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 CXCR6O00574 342 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 ORC5O43913 435 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 TRGC1P0CF51 173 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 FGF6P10767 208 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 RAB13P51153 203 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 CAV1Q03135 178 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 EMX1Q04741 257 aaPredicted RBP0.84□□□□□ -2.27
SCAF11-215ENST00000551391 FABP9Q0Z7S8 132 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 FAM27BQ5VT28 67 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 FAM173BQ6P4H8 233 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 LRRN1Q6UXK5 716 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 DEFB125Q8N687 156 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 ACOT12Q8WYK0 555 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 ANKRD7Q92527 254 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 C3orf18Q9UK00 162 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 TIMM22Q9Y584 194 aa0.84□□□□□ -2.27
SCAF11-215ENST00000551391 GLI3P10071 1580 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 TRBV10-2A0A0K0K1G8 114 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 IBA57-AS1B1ANH7 110 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 SLC16A4O15374 487 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 SRP19P09132 144 aaKnown RBP0.83□□□□□ -2.28
SCAF11-215ENST00000551391 SULT1A3P0DMM9 295 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 SULT1A4P0DMN0 295 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 UCHL3P15374 230 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 NFYAP23511 347 aaPredicted RBP0.83□□□□□ -2.28
SCAF11-215ENST00000551391 OR4D2P58180 307 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 RSU1Q15404 277 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 NDUFA5Q16718 116 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 C1orf195Q5TG92 126 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 Q8N2B8 174 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 OR1M1Q8NGA1 313 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 TESCQ96BS2 214 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 DIRAS2Q96HU8 199 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 OR8D2Q9GZM6 311 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 USE1Q9NZ43 259 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 LHFPL6Q9Y693 200 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 MAP3K5Q99683 1374 aa0.83□□□□□ -2.28
SCAF11-215ENST00000551391 DCCP43146 1447 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 GREB1Q4ZG55 1949 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 I3L521 148 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 M0QZ92 97 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 SLC22A1O15245 554 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 NOS1APO75052 506 aaPredicted RBP0.82□□□□□ -2.28
SCAF11-215ENST00000551391 IGHV3-7P01780 117 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 KRT7P08729 469 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 S100A7P31151 101 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 MAGEA2P43356 314 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 MAP2K4P45985 399 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 MARCKSL1P49006 195 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 BLVRAP53004 296 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 FXYD2P54710 66 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 PLCXD2Q0VAA5 305 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 CLVS2Q5SYC1 327 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 OGFRL1Q5TC84 451 aaPredicted RBP0.82□□□□□ -2.28
SCAF11-215ENST00000551391 DHFR2Q86XF0 187 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 ZNF676Q8N7Q3 588 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 OR8B3Q8NGG8 313 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 FGFR1OP2Q9NVK5 253 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 FUT9Q9Y231 359 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 STRCQ7RTU9 1775 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 TONSLQ96HA7 1378 aa0.82□□□□□ -2.28
SCAF11-215ENST00000551391 C9orf84Q5VXU9 1444 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 C21orf140B9A014 251 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 LRRN3E7EW58 273 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 H0Y980 276 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 CETN3O15182 167 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 FAM228BP0C875 321 aa0.81□□□□□ -2.28
SCAF11-215ENST00000551391 HLA-DMBP28068 263 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms