RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZBTB34Q8NCN2 500 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 NUDCD2Q8WVJ2 157 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 SRSF8Q9BRL6 282 aaKnown RBP9.6□□□□□ -0.87
PTCH1-221ENST00000550914 TAS2R8Q9NYW2 309 aa9.6□□□□□ -0.87
PTCH1-221ENST00000550914 MRPL27Q9P0M9 148 aaKnown RBP9.6□□□□□ -0.87
PTCH1-221ENST00000550914 NUPR2A6NF83 97 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 SSX5O60225 188 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 SCAF4O95104 1147 aaKnown RBP9.59□□□□□ -0.87
PTCH1-221ENST00000550914 MYOD1P15172 320 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-221ENST00000550914 HSPA13P48723 471 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 OR2B8PP59922 312 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 TNFRSF9Q07011 255 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 TIMM50Q3ZCQ8 353 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 BTNL8Q6UX41 500 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 RBPMS2Q6ZRY4 209 aaKnown RBP9.59□□□□□ -0.87
PTCH1-221ENST00000550914 Q6ZWC4 215 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 TPRA1Q86W33 373 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 OR1L6Q8NGR2 347 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 VCX3BQ9H321 246 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 C5orf66Q9H5L9 145 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 THYN1Q9P016 225 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 UFC1Q9Y3C8 167 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 S4R3C0 116 aa9.59□□□□□ -0.87
PTCH1-221ENST00000550914 IGLC7A0M8Q6 106 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 CGB1A6NKQ9 187 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 UBE2CO00762 179 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 MRPS14O60783 128 aaKnown RBP9.58□□□□□ -0.88
PTCH1-221ENST00000550914 PTBP1P26599 531 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTCH1-221ENST00000550914 BMI1P35226 326 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 APOC4P55056 127 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 TAS2R31P59538 309 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 POU2AF1Q16633 256 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 SSX9Q7RTT3 188 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 SLC38A6Q8IZM9 456 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 SPAG16Q8N0X2 631 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 OR2C3Q8N628 320 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 SPAG8Q99932 426 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-221ENST00000550914 ZNF436Q9C0F3 470 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-221ENST00000550914 HRASLSQ9HDD0 168 aa9.58□□□□□ -0.88
PTCH1-221ENST00000550914 CXorf65A6NEN9 183 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 CYB5BO43169 146 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 HPRT1P00492 218 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 REG1AP05451 166 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 NQO2P16083 231 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 GPR183P32249 361 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 SCAND1P57086 179 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 ARPC4P59998 168 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 GABARAPL2P60520 117 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 CATR1Q13166 79 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 ZNF585BQ52M93 769 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 THOC7Q6I9Y2 204 aaKnown RBP9.57□□□□□ -0.88
PTCH1-221ENST00000550914 PLET1Q6UQ28 207 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 BEST4Q8NFU0 473 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 OR13F1Q8NGS4 319 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 CD300LFQ8TDQ1 290 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 VN1R17PQ8TDU5 208 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 SECTM1Q8WVN6 248 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 ATP6V0BQ99437 205 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 COMMD5Q9GZQ3 224 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 TXNL4BQ9NX01 149 aaKnown RBP9.57□□□□□ -0.88
PTCH1-221ENST00000550914 RHBDL2Q9NX52 303 aa9.57□□□□□ -0.88
PTCH1-221ENST00000550914 KIR2DL5BA0A0G2JN68 375 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 KIR2DL5BA0A0G2JPC4 375 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 UPK2O00526 184 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 TSPAN4O14817 238 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 SPRY2O43597 315 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 LY6G6CO95867 125 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 PPYP01298 95 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 FCGR2CP31995 323 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 UBE2UQ5VVX9 321 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 SFXN4Q6P4A7 337 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 HSD17B13Q7Z5P4 300 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-221ENST00000550914 HOGA1Q86XE5 327 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 KIR2DL5AQ8N109 375 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 KIR2DL5BQ8NHK3 375 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 LGALS14Q8TCE9 139 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 TMEM190Q8WZ59 177 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 GPHA2Q96T91 129 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 QTRT1Q9BXR0 403 aaKnown RBP9.56□□□□□ -0.88
PTCH1-221ENST00000550914 PLEKHA2Q9HB19 425 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
PTCH1-221ENST00000550914 CCL28Q9NRJ3 127 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 DAPK2Q9UIK4 370 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 SELENOKQ9Y6D0 94 aa9.56□□□□□ -0.88
PTCH1-221ENST00000550914 A0A0A6YYH2 397 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 A0A0J9YWU9 116 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 SMIM30A4D0T7 59 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 A6NJ64 397 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 TGOLN2O43493 480 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 TNFSF12O43508 249 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 LAMTOR1Q6IAA8 161 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 SPSB3Q6PJ21 355 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 CEMP1Q6PRD7 247 aaPredicted RBP9.55□□□□□ -0.88
PTCH1-221ENST00000550914 LYG2Q86SG7 212 aa9.55□□□□□ -0.88
PTCH1-221ENST00000550914 GDPD1Q8N9F7 314 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms