RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SMIM30A4D0T7 59 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 ELLP55199 621 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 EIF4EBP1Q13541 118 aaPredicted RBP17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 ZNF585BQ52M93 769 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 TM4SF20Q53R12 229 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 PLET1Q6UQ28 207 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 BTNL8Q6UX41 500 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 SPAG16Q8N0X2 631 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 BEST4Q8NFU0 473 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 SRSF8Q9BRL6 282 aaKnown RBP17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 SSR3Q9UNL2 185 aa17.29■□□□□ 0.36
SMARCD1-209ENST00000550477 IGLV11-55A0A075B6I3 123 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 FCGR2CP31995 323 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 APOC4P55056 127 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 TAS2R31P59538 309 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 TIMM50Q3ZCQ8 353 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 C19orf35Q6ZS72 473 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 NR2C2APQ86WQ0 139 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 OVOL2Q9BRP0 275 aa17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 TXNL4BQ9NX01 149 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 RRP15Q9Y3B9 282 aaKnown RBP17.28■□□□□ 0.36
SMARCD1-209ENST00000550477 CXorf65A6NEN9 183 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 RBFOX2O43251 390 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 TNFSF12O43508 249 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 HPRT1P00492 218 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 REG1AP05451 166 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 NQO2P16083 231 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 BRWD1-AS2P59051 145 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 THOC7Q6I9Y2 204 aaKnown RBP17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 IZUMO2Q6UXV1 221 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 OR2C3Q8N628 320 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 CD300LFQ8TDQ1 290 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 BORCS5Q969J3 196 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 CCL28Q9NRJ3 127 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 RHBDL2Q9NX52 303 aa17.27■□□□□ 0.36
SMARCD1-209ENST00000550477 PTBP1P26599 531 aaKnown RBP eCLIP17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 PSMB9P28065 219 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 GABARAPL2P60520 117 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 LAMTOR1Q6IAA8 161 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 HSD17B13Q7Z5P4 300 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 DMBX1Q8NFW5 382 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 OR13F1Q8NGS4 319 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 FCGR1BQ92637 280 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 SPAG8Q99932 426 aaPredicted RBP17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 SLC5A7Q9GZV3 580 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 SELENOKQ9Y6D0 94 aa17.26■□□□□ 0.35
SMARCD1-209ENST00000550477 A0A1B0GW64 132 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 NUPR2A6NF83 97 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 SSX5O60225 188 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 PPYP01298 95 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 FGF2P09038 288 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 C8orf88P0DMB2 117 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 GPR183P32249 361 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 BMI1P35226 326 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 SCAND1P57086 179 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 OR2B8PP59922 312 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 SFXN4Q6P4A7 337 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 C5orf66Q9H5L9 145 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 TP53TG1Q9Y2A0 90 aa17.25■□□□□ 0.35
SMARCD1-209ENST00000550477 TRAV18A0A075B6X5 111 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 MFSD2BA6NFX1 497 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 UBE2CO00762 179 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 LY6G6CO95867 125 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 UBE2UQ5VVX9 321 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 Q6ZWC4 215 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 HOGA1Q86XE5 327 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 ZNF502Q8TBZ5 544 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 LGALS14Q8TCE9 139 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 VN1R17PQ8TDU5 208 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 GPHA2Q96T91 129 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 DIABLOQ9NR28 239 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 RAB26Q9ULW5 256 aa17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 EPPK1P58107 5090 aaKnown RBP17.24■□□□□ 0.35
SMARCD1-209ENST00000550477 A0A0A6YYH2 397 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 A6NJ64 397 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 SULT1C2O00338 296 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 UPK2O00526 184 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 ERVK-16P61578 105 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 UNQ9165/PRO28630Q6UXU0 137 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 WFDC3Q8IUB2 231 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 QTRT1Q9BXR0 403 aaKnown RBP17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 ETV7Q9Y603 341 aa17.23■□□□□ 0.35
SMARCD1-209ENST00000550477 SPRY2O43597 315 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 CBX5P45973 191 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 FXYD4P59646 89 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 POU2AF1Q16633 256 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 TMEM217Q8N7C4 229 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 LINC00476Q8WZB0 136 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 ZNF436Q9C0F3 470 aaPredicted RBP17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 PLEKHA2Q9HB19 425 aa17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 DAZ1Q9NQZ3 744 aaKnown RBP17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 KLK5Q9Y337 293 aaPredicted RBP17.22■□□□□ 0.35
SMARCD1-209ENST00000550477 BIRC6Q9NR09 4857 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 IGHV3-35A0A0C4DH35 117 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 TGOLN2O43493 480 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 TRAPPC2P0DI81 140 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 TRAPPC2BP0DI82 140 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 PMS2P11Q13670 270 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 AADACL3Q5VUY0 350 aa17.21■□□□□ 0.35
SMARCD1-209ENST00000550477 SLC25A24Q6NUK1 477 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms