RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 PSMD7P51665 324 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 RPL8P62917 257 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 TIMM50Q3ZCQ8 353 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 OR1L6Q8NGR2 347 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 VSTM2AQ8TAG5 236 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 RNF183Q96D59 192 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 HSD17B10Q99714 261 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF436Q9C0F3 470 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 CCDC90BQ9GZT6 254 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 ATG5Q9H1Y0 275 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 CCL28Q9NRJ3 127 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 BET1LQ9NYM9 111 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 TPRKBQ9Y3C4 175 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 RYR1P21817 5038 aa8.55□□□□□ -1.04
SMARCD1-208ENST00000550280 TRBV7-1A0A0A6YYK4 115 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 DPPA5A6NC42 116 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 ANKRD65E5RJM6 399 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 F8W735 103 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 TNFSF12O43508 249 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 ATF4P18848 351 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 GALP22466 123 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 FCGR2BP31994 310 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 BMI1P35226 326 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 MFAP2P55001 183 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 TBCEQ15813 527 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 CNIH2Q6PI25 160 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 OR2C3Q8N628 320 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 OR10W1Q8NGF6 305 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 TMEM190Q8WZ59 177 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 DCSTAMPQ9H295 470 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 C5orf66Q9H5L9 145 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 NDUFB11Q9NX14 153 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 MRPL27Q9P0M9 148 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 ANXA10Q9UJ72 324 aa8.54□□□□□ -1.04
SMARCD1-208ENST00000550280 TRDV1A0A1B0GX56 115 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 METTL21EPA6NDL7 271 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 PDCD5O14737 125 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 TSPAN4O14817 238 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 SLC22A5O76082 557 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 CTXN2P0C2S0 81 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 RPA2P15927 270 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 HIST1H1BP16401 226 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 ELLP55199 621 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 PRR20EP86478 221 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 PRR20CP86479 221 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 PRR20DP86480 221 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 PRR20BP86481 221 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 PRR20AP86496 221 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF124Q15973 351 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 POU2AF1Q16633 256 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 ANKRD55Q3KP44 614 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 C22orf42Q6IC83 251 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 ZNF66Q6ZN08 573 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 GVQW1Q8N7I0 195 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 MARC2Q969Z3 335 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 SPAG8Q99932 426 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 CHRDL1Q9BU40 450 aa8.53□□□□□ -1.04
SMARCD1-208ENST00000550280 IGHV3OR16-8A0A075B7F1 116 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 KIR2DL5BA0A0G2JN68 375 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 KIR2DL5BA0A0G2JPC4 375 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 UPK2O00526 184 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 TGOLN2O43493 480 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 RPL35AP18077 110 aaKnown RBP8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 PTBP1P26599 531 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 ADMP35318 185 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 RBPMS2Q6ZRY4 209 aaKnown RBP8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 ZNF367Q7RTV3 350 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 SPAG16Q8N0X2 631 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 KIR2DL5AQ8N109 375 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 KIR2DL5BQ8NHK3 375 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 PHLDA1Q8WV24 401 aaPredicted RBP8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 CXorf58Q96LI9 332 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 CENPOQ9BU64 300 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 MAP6D1Q9H9H5 199 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 UFC1Q9Y3C8 167 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 DNAH17Q9UFH2 4485 aa8.52□□□□□ -1.05
SMARCD1-208ENST00000550280 IGHV3-21A0A0B4J1V1 117 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 OR2T8A6NH00 312 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 SULT1C2O00338 296 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 UBE2CO00762 179 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 RBFOX2O43251 390 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 DHFRP00374 187 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 HRASP01112 189 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 DEFA4P12838 97 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 MYL9P24844 172 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 RANBP1P43487 201 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 APOC4P55056 127 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 PLET1Q6UQ28 207 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 OR13F1Q8NGS4 319 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 OR4A5Q8NH83 315 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 LGALS14Q8TCE9 139 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 SECTM1Q8WVN6 248 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 SLC25A38Q96DW6 304 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 VCXQ9H320 206 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
SMARCD1-208ENST00000550280 DNAH11Q96DT5 4516 aa8.5□□□□□ -1.05
SMARCD1-208ENST00000550280 NOTOA8MTQ0 251 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms