RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 C8orf88P0DMB2 117 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 GPR183P32249 361 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 TBCEQ15813 527 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-205ENST00000550013 C22orf42Q6IC83 251 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
RAB5C-205ENST00000550013 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 OR1L6Q8NGR2 347 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 ZNF502Q8TBZ5 544 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 UBQLN2Q9UHD9 624 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 ANXA10Q9UJ72 324 aa11.46□□□□□ -0.57
RAB5C-205ENST00000550013 TRAV25A0A0B4J276 109 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 SPRY2O43597 315 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 GNG2P59768 71 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 OR2B8PP59922 312 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 TNFRSF9Q07011 255 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-205ENST00000550013 ZNF66Q6ZN08 573 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 WFDC3Q8IUB2 231 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 OR2C3Q8N628 320 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 MARC2Q969Z3 335 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 CXorf58Q96LI9 332 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 CCL28Q9NRJ3 127 aa11.45□□□□□ -0.58
RAB5C-205ENST00000550013 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 IGLC7A0M8Q6 106 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 PTHLHP12272 177 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 GALP22466 123 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 SPAG16Q8N0X2 631 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 SECTM1Q8WVN6 248 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 HRASLSQ9HDD0 168 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 BET1LQ9NYM9 111 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 MRPL27Q9P0M9 148 aaKnown RBP11.44□□□□□ -0.58
RAB5C-205ENST00000550013 TP53TG1Q9Y2A0 90 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 HERC2O95714 4834 aa11.44□□□□□ -0.58
RAB5C-205ENST00000550013 BMI1P35226 326 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 APOC4P55056 127 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 PLET1Q6UQ28 207 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 Q6ZWC4 215 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 SLC38A6Q8IZM9 456 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 RPP25LQ8N5L8 163 aaKnown RBP11.43□□□□□ -0.58
RAB5C-205ENST00000550013 OR4A5Q8NH83 315 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 ZNF436Q9C0F3 470 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-205ENST00000550013 C5orf66Q9H5L9 145 aa11.43□□□□□ -0.58
RAB5C-205ENST00000550013 NOTOA8MTQ0 251 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 SULT1C2O00338 296 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 S1PR2O95136 353 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 RPA2P15927 270 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 FCGR2CP31995 323 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 ELLP55199 621 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-205ENST00000550013 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 ZNF773Q6PK81 442 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 OR13F1Q8NGS4 319 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 LGALS14Q8TCE9 139 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 TMEM190Q8WZ59 177 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 SPAG8Q99932 426 aaPredicted RBP11.42□□□□□ -0.58
RAB5C-205ENST00000550013 DAPK2Q9UIK4 370 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 VPS13DQ5THJ4 4388 aa11.42□□□□□ -0.58
RAB5C-205ENST00000550013 UPK2O00526 184 aa11.41□□□□□ -0.58
RAB5C-205ENST00000550013 TGOLN2O43493 480 aa11.41□□□□□ -0.58
RAB5C-205ENST00000550013 RPL35AP18077 110 aaKnown RBP11.41□□□□□ -0.58
RAB5C-205ENST00000550013 PTBP1P26599 531 aaKnown RBP eCLIP11.41□□□□□ -0.586e-22■■■■■ 138.4
RAB5C-205ENST00000550013 ARPC4P59998 168 aa11.41□□□□□ -0.58
RAB5C-205ENST00000550013 GVQW1Q8N7I0 195 aa11.41□□□□□ -0.58
RAB5C-205ENST00000550013 CNBD2Q96M20 576 aa11.41□□□□□ -0.58
RAB5C-205ENST00000550013 IGHV3OR16-8A0A075B7F1 116 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 UBE2CO00762 179 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 TSPAN4O14817 238 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 RBFOX2O43251 390 aaKnown RBP eCLIP11.4□□□□□ -0.58
RAB5C-205ENST00000550013 DEDDO75618 318 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 PPYP01298 95 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 FCER2P06734 321 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 TAS2R31P59538 309 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 MSMO1Q15800 293 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 POU2AF1Q16633 256 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 BEST4Q8NFU0 473 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 RNF183Q96D59 192 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 AIFM2Q9BRQ8 373 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 QTRT1Q9BXR0 403 aaKnown RBP11.4□□□□□ -0.58
RAB5C-205ENST00000550013 COMMD5Q9GZQ3 224 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 SLC5A7Q9GZV3 580 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 TMEM140Q9NV12 185 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 TXNL4BQ9NX01 149 aaKnown RBP11.4□□□□□ -0.58
RAB5C-205ENST00000550013 RHBDL2Q9NX52 303 aa11.4□□□□□ -0.58
RAB5C-205ENST00000550013 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
RAB5C-205ENST00000550013 IGHV3-21A0A0B4J1V1 117 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 ZNF207O43670 478 aaKnown RBP11.39□□□□□ -0.59
RAB5C-205ENST00000550013 SCGNO76038 276 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 HPRT1P00492 218 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 NQO2P16083 231 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 FXYD4P59646 89 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 WT1-ASQ06250 92 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 GDPD1Q8N9F7 314 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 OR51H1Q8NH63 302 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 VN1R17PQ8TDU5 208 aa11.39□□□□□ -0.59
RAB5C-205ENST00000550013 SRSF8Q9BRL6 282 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms