RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 HLA-GP17693 338 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 ATF4P18848 351 aaPredicted RBP10.13□□□□□ -0.79
TROAP-211ENST00000549891 AQP4P55087 323 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 GNG2P59768 71 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 EIF4EBP1Q13541 118 aaPredicted RBP10.13□□□□□ -0.79
TROAP-211ENST00000549891 ZNF585BQ52M93 769 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 SSX9Q7RTT3 188 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 OR2C3Q8N628 320 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 HRASLSQ9HDD0 168 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 BET1LQ9NYM9 111 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 ANXA10Q9UJ72 324 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 BLOC1S6Q9UL45 172 aa10.13□□□□□ -0.79
TROAP-211ENST00000549891 KLK5Q9Y337 293 aaPredicted RBP10.13□□□□□ -0.79
TROAP-211ENST00000549891 A0A1B0GW64 132 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 SPRY2O43597 315 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 REG1AP05451 166 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 GPR183P32249 361 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 MSMO1Q15800 293 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 TIMM50Q3ZCQ8 353 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
TROAP-211ENST00000549891 PLET1Q6UQ28 207 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 UNQ9165/PRO28630Q6UXU0 137 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 LYG2Q86SG7 212 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 TMEM217Q8N7C4 229 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 NUDCD2Q8WVJ2 157 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 SPAG8Q99932 426 aaPredicted RBP10.12□□□□□ -0.79
TROAP-211ENST00000549891 SRSF8Q9BRL6 282 aaKnown RBP10.12□□□□□ -0.79
TROAP-211ENST00000549891 C5orf66Q9H5L9 145 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 FRAS1Q86XX4 4008 aa10.12□□□□□ -0.79
TROAP-211ENST00000549891 KIR2DL5BA0A0G2JN68 375 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 KIR2DL5BA0A0G2JPC4 375 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 TMEM235A6NFC5 223 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 MFSD2BA6NFX1 497 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 RBFOX2O43251 390 aaKnown RBP eCLIP10.11□□□□□ -0.79
TROAP-211ENST00000549891 PTBP1P26599 531 aaKnown RBP eCLIP10.11□□□□□ -0.79
TROAP-211ENST00000549891 BRWD1-AS2P59051 145 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 ARPC4P59998 168 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 LAMTOR1Q6IAA8 161 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 KIR2DL5AQ8N109 375 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 STPG3Q8N7X2 389 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 ZBTB34Q8NCN2 500 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 KIR2DL5BQ8NHK3 375 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 SECTM1Q8WVN6 248 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 COMMD5Q9GZQ3 224 aa10.11□□□□□ -0.79
TROAP-211ENST00000549891 NOTOA8MTQ0 251 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 TSPAN4O14817 238 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 FGF2P09038 288 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 TAS2R31P59538 309 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 OR2B8PP59922 312 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 CATR1Q13166 79 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 DEFB135Q30KP9 77 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 THOC7Q6I9Y2 204 aaKnown RBP10.1□□□□□ -0.79
TROAP-211ENST00000549891 NR2C2APQ86WQ0 139 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 SPAG16Q8N0X2 631 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 ZNF502Q8TBZ5 544 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 VN1R17PQ8TDU5 208 aa10.1□□□□□ -0.79
TROAP-211ENST00000549891 ZNF436Q9C0F3 470 aaPredicted RBP10.1□□□□□ -0.79
TROAP-211ENST00000549891 DAZ1Q9NQZ3 744 aaKnown RBP10.1□□□□□ -0.79
TROAP-211ENST00000549891 KMT2AQ03164 3969 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 CGB1A6NKQ9 187 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 TNFSF12O43508 249 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 HPRT1P00492 218 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 NQO2P16083 231 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 HSD17B13Q7Z5P4 300 aaPredicted RBP10.09□□□□□ -0.79
TROAP-211ENST00000549891 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 OR13F1Q8NGS4 319 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 QTRT1Q9BXR0 403 aaKnown RBP10.09□□□□□ -0.79
TROAP-211ENST00000549891 VCX3BQ9H321 246 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 CCL28Q9NRJ3 127 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 UBQLN2Q9UHD9 624 aa10.09□□□□□ -0.79
TROAP-211ENST00000549891 IGHV3-35A0A0C4DH35 117 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 IGLC7A0M8Q6 106 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 OR4C46A6NHA9 309 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 TGOLN2O43493 480 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 SSX5O60225 188 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 FCGR2CP31995 323 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 POU2AF1Q16633 256 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 SPSB3Q6PJ21 355 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 BEST4Q8NFU0 473 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 NRG4Q8WWG1 115 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 RNF183Q96D59 192 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 BSCL2Q96G97 398 aaPredicted RBP10.08□□□□□ -0.8
TROAP-211ENST00000549891 GPHA2Q96T91 129 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 C6orf62Q9GZU0 229 aaPredicted RBP10.08□□□□□ -0.8
TROAP-211ENST00000549891 DAPK2Q9UIK4 370 aa10.08□□□□□ -0.8
TROAP-211ENST00000549891 SMIM30A4D0T7 59 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 SULT1C2O00338 296 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 UPK2O00526 184 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 PPYP01298 95 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 FGF9P31371 208 aaPredicted RBP10.07□□□□□ -0.8
TROAP-211ENST00000549891 HSPA13P48723 471 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 EWSR1Q01844 656 aaKnown RBP eCLIP10.07□□□□□ -0.8
TROAP-211ENST00000549891 GDPD1Q8N9F7 314 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 DMBX1Q8NFW5 382 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 BORCS5Q969J3 196 aa10.07□□□□□ -0.8
TROAP-211ENST00000549891 GALNT14Q96FL9 552 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms