RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 IL6P05231 212 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 RPS4Y1P22090 263 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ALDH3A1P30838 453 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 GNRHRP30968 328 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 RANBP1P43487 201 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SRP9P49458 86 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 UBE2E1P51965 193 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR2B8PP59922 312 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 DSTNP60981 165 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 PCBD1P61457 104 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ERVS71-1P61550 626 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 VSNL1P62760 191 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 RPL23P62829 140 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 RPL18AQ02543 176 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 IFFO1Q0D2I5 559 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 FUT5Q11128 374 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ST3GAL4Q11206 333 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 DYNC1I2Q13409 638 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF266Q14584 549 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 CASP8Q14790 479 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 KCNJ8Q15842 424 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 DEFB112Q30KQ8 113 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ACTL10Q5JWF8 245 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 TTC33Q6PID6 262 aaPredicted RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SSX6Q7RTT6 188 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 LRRC28Q86X40 367 aaPredicted RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 C4orf33Q8N1A6 199 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 LRRC18Q8N456 261 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR2Z1Q8NG97 314 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR4S1Q8NGB4 309 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR8B3Q8NGG8 313 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR5J2Q8NH18 312 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 CIRBP-AS1Q8TBR5 109 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 KLF14Q8TD94 323 aaPredicted RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SLC25A44Q96H78 314 aaPredicted RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 PPP1R36Q96LQ0 422 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 UBE2E2Q96LR5 201 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 ZNF488Q96MN9 340 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 CCDC115Q96NT0 180 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 TSPAN32Q96QS1 320 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR8B2Q96RD0 313 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 OR52E6Q96RD3 313 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 TSNAXQ99598 290 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 HSD17B10Q99714 261 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SLIRPQ9GZT3 109 aaKnown RBP2.34□□□□□ -2.03
PTCH1-216ENST00000548379 CENPHQ9H3R5 247 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 PLEKHA1Q9HB21 404 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 WFDC1Q9HC57 220 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 SIRT7Q9NRC8 400 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 TMEM38BQ9NVV0 291 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 GLTPQ9NZD2 209 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 KLF12Q9Y4X4 402 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 URGCP-MRPS24S4R325 110 aa2.34□□□□□ -2.03
PTCH1-216ENST00000548379 CUBNO60494 3623 aa2.34□□□□□ -2.04
PTCH1-216ENST00000548379 ZGRF1Q86YA3 2104 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 IGHV1-69DA0A0B4J2H0 117 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 KIR2DS1A0A191URI9 304 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 MDFIC2A0A1B0GVS7 189 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 A0A1B0GWA3 101 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 CEACAM18A8MTB9 384 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 CENPBD1B2RD01 187 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 TRAPPC2LH3BP13 241 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 PLPP3O14495 311 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 SLC22A5O76082 557 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 CD74P04233 296 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 S100A6P06703 90 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 CD37P11049 281 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 TGFBR2P37173 567 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 MYCNOSP40205 109 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 PMELP40967 661 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 OPRK1P41145 380 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 RPL14P50914 215 aaKnown RBP2.33□□□□□ -2.04
PTCH1-216ENST00000548379 UBE2KP61086 200 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 FGF12P61328 243 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 HOXC5Q00444 222 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 MAPRE2Q15555 327 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 PABPC1L2AQ5JQF8 200 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 NKAIN4Q8IVV8 208 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF283Q8N7M2 679 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 OR5L1Q8NGL2 311 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 OR11L1Q8NGX0 322 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 SLC25A40Q8TBP6 338 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 TNFRSF14Q92956 283 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 RBP7Q96R05 134 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 CIB1Q99828 191 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 RNF5Q99942 180 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 COPS4Q9BT78 406 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 OR2J1Q9GZK6 312 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 FGF23Q9GZV9 251 aaPredicted RBP2.33□□□□□ -2.04
PTCH1-216ENST00000548379 TPT1P8Q9HAU6 139 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 SDHAF2Q9NX18 166 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 CYB5R1Q9UHQ9 305 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 PUS1Q9Y606 427 aaKnown RBP eCLIP2.33□□□□□ -2.04
PTCH1-216ENST00000548379 DOCK10Q96BY6 2186 aa2.33□□□□□ -2.04
PTCH1-216ENST00000548379 HRNRQ86YZ3 2850 aaPredicted RBP2.32□□□□□ -2.04
PTCH1-216ENST00000548379 CACNA1CQ13936 2221 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 IGHV3-72A0A0B4J1Y9 119 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 A0A1B0GTI1 187 aa2.32□□□□□ -2.04
PTCH1-216ENST00000548379 A0A1B0GX12 115 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms