RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LFNGQ8NES3 379 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 CLDND2Q8NHS1 167 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 C10orf105Q8TEF2 133 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 BSCL2Q96G97 398 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-215ENST00000547672 BPESC1Q9GZL8 116 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 KCNIP2Q9NS61 270 aa10.9□□□□□ -0.66
PTCH1-215ENST00000547672 TBL2Q9Y4P3 447 aaKnown RBP10.9□□□□□ -0.66
PTCH1-215ENST00000547672 MFSD2BA6NFX1 497 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 TOX4O94842 621 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 HBE1P02100 147 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 IFNA4P05014 189 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 SAA1P0DJI8 122 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-215ENST00000547672 DVL1P1P54792 670 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-215ENST00000547672 OR8G2PQ6IF36 304 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 ETV3LQ6ZN32 361 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 ZNF295-AS1Q8N0V1 137 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 OR4P4Q8NGL7 312 aa10.89□□□□□ -0.67
PTCH1-215ENST00000547672 TEX50A0A1B0GTY4 177 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 ANKRD34BA5PLL1 514 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 ODF3BA8MYP8 253 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 TSPAN15O95858 294 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 SLC25A16P16260 332 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 UBE2E1P51965 193 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 LCN2P80188 198 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 DLK1P80370 383 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 AANATQ16613 207 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 VWC2Q2TAL6 325 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 VMO1Q7Z5L0 202 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 CENPVQ7Z7K6 275 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-215ENST00000547672 THNSL2Q86YJ6 484 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 TAF15Q92804 592 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTCH1-215ENST00000547672 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 MALSU1Q96EH3 234 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 OR4C12Q96R67 309 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 WDR61Q9GZS3 305 aaKnown RBP10.88□□□□□ -0.67
PTCH1-215ENST00000547672 ZNRD1Q9P1U0 126 aa10.88□□□□□ -0.67
PTCH1-215ENST00000547672 TRAV3A0A0B4J244 114 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 SRRM4A7MD48 611 aaKnown RBP10.87□□□□□ -0.67
PTCH1-215ENST00000547672 I3L521 148 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 NPY1RP25929 384 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 PJVKQ0ZLH3 352 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 PXDC1Q5TGL8 231 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 SLC24A4Q8NFF2 622 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 CXorf58Q96LI9 332 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 SRSF8Q9BRL6 282 aaKnown RBP10.87□□□□□ -0.67
PTCH1-215ENST00000547672 PBDC1Q9BVG4 233 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 HINT2Q9BX68 163 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 SIRPDQ9H106 197 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 KIAA1456Q9P272 454 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 DOPEY1Q5JWR5 2465 aa10.87□□□□□ -0.67
PTCH1-215ENST00000547672 GCN1Q92616 2671 aaKnown RBP10.87□□□□□ -0.67
PTCH1-215ENST00000547672 C15orf62A8K5M9 175 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 VWC2LB2RUY7 222 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 MOSP00540 346 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 SNRNP70P08621 437 aaKnown RBP10.86□□□□□ -0.67
PTCH1-215ENST00000547672 GATA3P23771 443 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 ZFP36P26651 326 aaKnown RBP10.86□□□□□ -0.67
PTCH1-215ENST00000547672 BRS3P32247 399 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 PAX2Q02962 417 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 C2orf83Q53S99 150 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 TMEM182Q6ZP80 229 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-215ENST00000547672 Q6ZRG5 221 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 LYPD6BQ8NI32 183 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 PCNPQ8WW12 178 aaKnown RBP10.86□□□□□ -0.67
PTCH1-215ENST00000547672 CACNG8Q8WXS5 425 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 REG4Q9BYZ8 158 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 NPVFQ9HCQ7 196 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 SIRT7Q9NRC8 400 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 NDUFA4L2Q9NRX3 87 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 BEX4Q9NWD9 120 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-215ENST00000547672 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
PTCH1-215ENST00000547672 PMS2P5A8MQ11 134 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 J3QKU1 62 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 HAX1O00165 279 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 IGLV2-23P01705 113 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 GPX4P36969 197 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-215ENST00000547672 ARL16Q0P5N6 197 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 HABP2Q14520 560 aaPredicted RBP10.85□□□□□ -0.67
PTCH1-215ENST00000547672 PEA15Q15121 130 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 PSG5Q15238 335 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 PRSS8Q16651 343 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 HRH4Q9H3N8 390 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 C1RLQ9NZP8 487 aa10.85□□□□□ -0.67
PTCH1-215ENST00000547672 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
PTCH1-215ENST00000547672 A0A1W2PPI3 338 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 SLC25A17O43808 307 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 H2AFB1P0C5Y9 115 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 FAM106CPP0CH98 169 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 RNF224P0DH78 156 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 FGF7P21781 194 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 ZNF616Q08AN1 781 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 DIAPH2-AS1Q14236 149 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 PLGLAQ15195 96 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 SPINK9Q5DT21 86 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 ETFRF1Q6IPR1 90 aa10.84□□□□□ -0.67
PTCH1-215ENST00000547672 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms