RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR4A5Q8NH83 315 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 CACNG8Q8WXS5 425 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 NEURL2Q9BR09 285 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 SPATA25Q9BR10 227 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 RETNQ9HD89 108 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 HRASLSQ9HDD0 168 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
CPSF6-204ENST00000547486 IGLV11-55A0A075B6I3 123 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 IGLC7A0M8Q6 106 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
CPSF6-204ENST00000547486 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
CPSF6-204ENST00000547486 UPK2O00526 184 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 HPRT1P00492 218 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 CLEC3BP05452 202 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
CPSF6-204ENST00000547486 RPA2P15927 270 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 CBLN1P23435 193 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 ARL3P36405 182 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 RFX2P48378 723 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 TAS2R31P59538 309 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 POU2AF1Q16633 256 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 DHRS11Q6UWP2 260 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 OR51H1Q8NH63 302 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 YIPF6Q96EC8 236 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 WDR89Q96FK6 387 aaPredicted RBP10.05□□□□□ -0.8
CPSF6-204ENST00000547486 WFDC10AQ9H1F0 79 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 PALMDQ9NP74 551 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 ZC4H2Q9NQZ6 224 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 SACSQ9NZJ4 4579 aa10.05□□□□□ -0.8
CPSF6-204ENST00000547486 ZNF320A2RRD8 509 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 MFSD2BA6NFX1 497 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 TMEM127O75204 238 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 S1PR2O95136 353 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 DEFA4P12838 97 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 CBX5P45973 191 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 LSM3P62310 102 aaKnown RBP10.04□□□□□ -0.8
CPSF6-204ENST00000547486 GUCA2BQ16661 112 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 FAM209BQ5JX69 171 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 TMEM17Q86X19 198 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 LAX1Q8IWV1 398 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 OR10W1Q8NGF6 305 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 EEF1AKMT3Q96AZ1 226 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 ISOC1Q96CN7 298 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 S100A16Q96FQ6 103 aaKnown RBP10.04□□□□□ -0.8
CPSF6-204ENST00000547486 HIPK2Q9H2X6 1198 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 TECRQ9NZ01 308 aaKnown RBP10.04□□□□□ -0.8
CPSF6-204ENST00000547486 CEPT1Q9Y6K0 416 aa10.04□□□□□ -0.8
CPSF6-204ENST00000547486 DYNC2H1Q8NCM8 4307 aaKnown RBP10.03□□□□□ -0.8
CPSF6-204ENST00000547486 TMEM213A2RRL7 107 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
CPSF6-204ENST00000547486 TPPPO94811 219 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 DHFRP00374 187 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 PMP2P02689 132 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 NQO2P16083 231 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 HIST1H1BP16401 226 aaKnown RBP10.03□□□□□ -0.8
CPSF6-204ENST00000547486 TAS2R20P59543 309 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 CATR1Q13166 79 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 TM4SF20Q53R12 229 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 AADACL3Q5VUY0 350 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 UNQ9165/PRO28630Q6UXU0 137 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 LYSMD2Q8IV50 215 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 SAMD12Q8N8I0 201 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 AIFM2Q9BRQ8 373 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 ZNF2Q9BSG1 426 aaPredicted RBP10.03□□□□□ -0.8
CPSF6-204ENST00000547486 PLEKHA2Q9HB19 425 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 TMEM140Q9NV12 185 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 SLC2A8Q9NY64 477 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 EHFQ9NZC4 300 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 MLXQ9UH92 298 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 ANAPC10Q9UM13 185 aa10.03□□□□□ -0.8
CPSF6-204ENST00000547486 TRBV7-1A0A0A6YYK4 115 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 LCE6AA0A183 80 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 TEX50A0A1B0GTY4 177 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 OR11H12B2RN74 326 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 NAT1P18440 290 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 UBE2NLQ5JXB2 153 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 CROCCP3Q8IVE0 287 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 TMEM61Q8N0U2 210 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 UXS1Q8NBZ7 420 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 DMBX1Q8NFW5 382 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 ZNF502Q8TBZ5 544 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 CD300LFQ8TDQ1 290 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 MOB3AQ96BX8 217 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 FAM110AQ9BQ89 295 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 COMMD5Q9GZQ3 224 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 IFT46Q9NQC8 304 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.81
CPSF6-204ENST00000547486 IGHV3-35A0A0C4DH35 117 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 A8MWP6 167 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 RLN1P04808 185 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 IFNA6P05013 189 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 HERV-K104P61576 105 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 WT1-ASQ06250 92 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 ZNF585BQ52M93 769 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 TMEM69Q5SWH9 247 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 FCAMRQ8WWV6 532 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 CXorf58Q96LI9 332 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 SRD5A3Q9H8P0 318 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms