RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 OPRK1P41145 380 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 SELENOVP59797 346 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 RPL30P62888 115 aaKnown RBP8.91□□□□□ -0.98
NPAS3-205ENST00000547068 HES3Q5TGS1 186 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 MRPL54Q6P161 138 aaKnown RBP8.91□□□□□ -0.98
NPAS3-205ENST00000547068 NUDT11Q96G61 164 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 SEPSECSQ9HD40 501 aaKnown RBP8.91□□□□□ -0.98
NPAS3-205ENST00000547068 TMEM238C9JI98 176 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 MPDU1O75352 247 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 APCSP02743 223 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 CCL2P13500 99 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 LIFP15018 202 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 GCHFRP30047 84 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 GNG4P50150 75 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 ARG2P78540 354 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 FXYD3Q14802 87 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 MIC13Q5XKP0 118 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 PRR27Q6MZM9 219 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF808Q8N4W9 903 aaPredicted RBP8.91□□□□□ -0.98
NPAS3-205ENST00000547068 ZNF645Q8N7E2 425 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 BCL2L2Q92843 193 aaPredicted RBP8.91□□□□□ -0.98
NPAS3-205ENST00000547068 RNASE7Q9H1E1 156 aaKnown RBP8.91□□□□□ -0.98
NPAS3-205ENST00000547068 USF3Q68DE3 2245 aa8.91□□□□□ -0.98
NPAS3-205ENST00000547068 H0YJW9 148 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 K7ERU9 68 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 TAX1BP3O14907 124 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 HSBP1O75506 76 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 RAC3P60763 192 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 ARF1P84077 181 aaKnown RBP8.9□□□□□ -0.98
NPAS3-205ENST00000547068 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 DOLPP1Q86YN1 238 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 C11orf52Q96A22 123 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 HES4Q9HCC6 221 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 CHTOPQ9Y3Y2 248 aaKnown RBP8.9□□□□□ -0.98
NPAS3-205ENST00000547068 LOXL2Q9Y4K0 774 aa8.9□□□□□ -0.98
NPAS3-205ENST00000547068 LOC102724200A0A096LPH7 203 aaPredicted RBP8.9□□□□□ -0.99
NPAS3-205ENST00000547068 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 OR2T8A6NH00 312 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 GJE1A6NN92 205 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 C17orf98A8MV24 154 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 RAB29O14966 203 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 SCRG1O75711 98 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 TOX4O94842 621 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 CLDN14O95500 239 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 MT-CO2P00403 227 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 LINC00869P0C866 280 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 CCL3P10147 92 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 CA6P23280 308 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 OTX2P32243 289 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 CATR1Q13166 79 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 CENPWQ5EE01 88 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 SPATA46Q5T0L3 261 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 SCCPDHQ8NBX0 429 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 C18orf32Q8TCD1 76 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 WASHC3Q9Y3C0 194 aa8.9□□□□□ -0.99
NPAS3-205ENST00000547068 SDK2Q58EX2 2172 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 C5orf49A4QMS7 147 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 HELTA6NFD8 242 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 ZNF716A6NP11 495 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 M0R2Z0 102 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 NEURL1O76050 574 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 IGHV3-9P01782 118 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 OR10J4P0C629 311 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 CCL4P13236 92 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 RAC2P15153 192 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 TNXAQ16473 311 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 TMEM164Q5U3C3 297 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 CLEC2AQ6UVW9 174 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 ZNF497Q6ZNH5 498 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 PQLC2Q6ZP29 291 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 ZBTB34Q8NCN2 500 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 MGST2Q99735 147 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 KNTC1P50748 2209 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 ZNF292O60281 2723 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 CDIPTO14735 213 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 RHBDL1O75783 438 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 UBE2G1P62253 170 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 TBR1Q16650 682 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 Q6P435 159 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 OR8B3Q8NGG8 313 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 NEUROG1Q92886 237 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 ST6GALNAC6Q969X2 333 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 SMIM12Q96EX1 92 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 OR8B2Q96RD0 313 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 GGTLC1Q9BX51 225 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 TP73-AS1Q9UF72 201 aa8.89□□□□□ -0.99
NPAS3-205ENST00000547068 GVINP1Q7Z2Y8 2422 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 TNRC6AQ8NDV7 1962 aaKnown RBP8.88□□□□□ -0.99
NPAS3-205ENST00000547068 CIDEAO60543 219 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 NUDT3O95989 172 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 USF1P22415 310 aaPredicted RBP8.88□□□□□ -0.99
NPAS3-205ENST00000547068 CLDN18P56856 261 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 SSMEM1Q8WWF3 244 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 OSTCQ9NRP0 149 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 RPH3ALQ9UNE2 315 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 ADAMTS20P59510 1910 aa8.88□□□□□ -0.99
NPAS3-205ENST00000547068 GAGE12BA1L429 117 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms