RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SCRT1Q9BWW7 348 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 KIAA1456Q9P272 454 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 CTSZQ9UBR2 303 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 TRAV20A0A0B4J274 112 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 IGHV1-69-2A0A0G2JMI3 117 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 C15orf62A8K5M9 175 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 SRP19P09132 144 aaKnown RBP10.43□□□□□ -0.74
SCAF11-209ENST00000547018 SNRPEP62304 92 aaKnown RBP10.43□□□□□ -0.74
SCAF11-209ENST00000547018 NPCDR1Q9BY65 106 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 MS4A5Q9H3V2 200 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 SIRT7Q9NRC8 400 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 ELOVL5Q9NYP7 299 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 DOK5Q9P104 306 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 SHISA9B4DS77 424 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 TMEM178BH3BS89 294 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 PPIHO43447 177 aaKnown RBP10.43□□□□□ -0.74
SCAF11-209ENST00000547018 TRAT1Q6PIZ9 186 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 LAMP3Q9UQV4 416 aa10.43□□□□□ -0.74
SCAF11-209ENST00000547018 J3QR06 171 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 FCN3O75636 299 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 WNT2P09544 360 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 PDZD11Q5EBL8 140 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 C1orf174Q8IYL3 243 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 SMIM7Q9BQ49 75 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 OR51B2Q9Y5P1 312 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 CA2P00918 260 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 HBE1P02100 147 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 CT45A6P0DMU7 189 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 CT45A5P0DMU8 189 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 CT45A7P0DMV0 189 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 RAB7AP51149 207 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 LGALS4P56470 323 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 RELBQ01201 579 aa10.42□□□□□ -0.74
SCAF11-209ENST00000547018 DHRS7BQ6IAN0 325 aaPredicted RBP10.42□□□□□ -0.74
SCAF11-209ENST00000547018 PGPEP1LA6NFU8 196 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 SLC25A17O43808 307 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 NDUFS7O75251 213 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 TMEM41BQ5BJD5 291 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 CIB3Q96Q77 187 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-209ENST00000547018 ONECUT1Q9UBC0 465 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 NOTCH2Q04721 2471 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 SONP18583 2426 aaKnown RBP10.41□□□□□ -0.74
SCAF11-209ENST00000547018 F2RL2O00254 374 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 BCL2P10415 239 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 RTL8BQ17RB0 113 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 HCP5Q6MZN7 132 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 FAM216AQ8WUB2 273 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 VKORC1Q9BQB6 163 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 RPUSD1Q9UJJ7 312 aaKnown RBP10.41□□□□□ -0.74
SCAF11-209ENST00000547018 CFHR2P36980 270 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
SCAF11-209ENST00000547018 HIST1H2BAQ96A08 127 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 COMMD5Q9GZQ3 224 aa10.41□□□□□ -0.74
SCAF11-209ENST00000547018 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 COLCA2A8K830 154 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 SAA1P0DJI8 122 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-209ENST00000547018 NPY1RP25929 384 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 GATA4P43694 442 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 SPCS3P61009 180 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 ARF6P62330 175 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
SCAF11-209ENST00000547018 RITA1Q96K30 269 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 PLEKHA3Q9HB20 300 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 CELSR2Q9HCU4 2923 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 C1orf196B1AJZ1 125 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 CDKN1AP38936 164 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 NUP37Q8NFH4 326 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 SSX3Q99909 188 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.74
SCAF11-209ENST00000547018 TGIF2-C20orf24A0A0A6YYL0 155 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 SIAH2O43255 324 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 APOBEC3AP31941 199 aaPredicted RBP10.39□□□□□ -0.75
SCAF11-209ENST00000547018 CDC34P49427 236 aaPredicted RBP10.39□□□□□ -0.75
SCAF11-209ENST00000547018 C10orf91Q5T1B1 145 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 COMMD1Q8N668 190 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 SLC24A4Q8NFF2 622 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF251Q9BRH9 671 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 LPAR2Q9HBW0 351 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 TPSG1Q9NRR2 321 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 HILPDAQ9Y5L2 63 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
SCAF11-209ENST00000547018 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 E7EUB6 86 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 HRASP01112 189 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 APOA2P02652 100 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 IGFBP2P18065 325 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 DMRTC2Q8IXT2 367 aaPredicted RBP10.39□□□□□ -0.75
SCAF11-209ENST00000547018 OR10A7Q8NGE5 316 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 ACTR3CQ9C0K3 210 aaPredicted RBP10.39□□□□□ -0.75
SCAF11-209ENST00000547018 UQCRFS1P47985 274 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 PSMB3P49720 205 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 THBS3P49746 956 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 COA4Q9NYJ1 87 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 PXMP4Q9Y6I8 212 aa10.39□□□□□ -0.75
SCAF11-209ENST00000547018 LOC102723971A0A1B0GUV8 181 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 ZNF98A6NK75 572 aa10.38□□□□□ -0.75
SCAF11-209ENST00000547018 CYB5BO43169 146 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms