RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
SCAF11-208ENST00000546534 CGB1A6NKQ9 187 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 J3QRK9 145 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 SLC17A2O00624 439 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 MYL12BO14950 172 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 RTL8CO15255 209 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 ATP5HO75947 161 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 CDK1P06493 297 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 MAS1LP35410 378 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 ARFRP1Q13795 201 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 KCTD9Q7L273 389 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 OR4A5Q8NH83 315 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 VSTM2AQ8TAG5 236 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
SCAF11-208ENST00000546534 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-208ENST00000546534 PRELID3BQ9Y3B1 194 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 DNAH6Q9C0G6 4158 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 DNAH2Q9P225 4427 aa9.31□□□□□ -0.92
SCAF11-208ENST00000546534 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-208ENST00000546534 C11orf94C9JXX5 98 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 RAB27BO00194 218 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 CTSDP07339 412 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-208ENST00000546534 UCHL1P09936 223 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 CRHBPP24387 322 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 CLDN12P56749 244 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 PLA2G7Q13093 441 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 SSX9Q7RTT3 188 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 ZNF645Q8N7E2 425 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 MRPS7Q9Y2R9 242 aaKnown RBP9.3□□□□□ -0.92
SCAF11-208ENST00000546534 DNAH11Q96DT5 4516 aa9.3□□□□□ -0.92
SCAF11-208ENST00000546534 IGKV1D-8A0A087WSZ0 117 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 TGOLN2O43493 480 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 DENRO43583 198 aaKnown RBP9.29□□□□□ -0.92
SCAF11-208ENST00000546534 PTBP1P26599 531 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCAF11-208ENST00000546534 BRWD1-AS2P59051 145 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 RPL8P62917 257 aaKnown RBP9.29□□□□□ -0.92
SCAF11-208ENST00000546534 RAB11BQ15907 218 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 FAM3DQ96BQ1 224 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 RAB3CQ96E17 227 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 PSORS1C1Q9UIG5 152 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 RBMX2Q9Y388 322 aaKnown RBP9.29□□□□□ -0.92
SCAF11-208ENST00000546534 AK6Q9Y3D8 172 aaKnown RBP9.29□□□□□ -0.92
SCAF11-208ENST00000546534 U3KQE9 123 aa9.29□□□□□ -0.92
SCAF11-208ENST00000546534 DYNC1H1Q14204 4646 aaKnown RBP9.28□□□□□ -0.92
SCAF11-208ENST00000546534 IGHV4-4A0A075B6R2 117 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 ZNF207O43670 478 aaKnown RBP9.28□□□□□ -0.92
SCAF11-208ENST00000546534 IGLV2-14P01704 120 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 HLA-GP17693 338 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 IRF3Q14653 427 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 C2orf76Q3KRA6 126 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 LAIR2Q6ISS4 152 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 PQLC1Q8N2U9 271 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 OR4S2Q8NH73 311 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 CYGBQ8WWM9 190 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 C20orf24Q9BUV8 137 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 HRH4Q9H3N8 390 aa9.28□□□□□ -0.92
SCAF11-208ENST00000546534 A0A075B6Q4 140 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 IGLC7A0M8Q6 106 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 OR2T8A6NH00 312 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 MFNGO00587 321 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 CA1P00915 261 aaPredicted RBP9.27□□□□□ -0.93
SCAF11-208ENST00000546534 GNB3P16520 340 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 CD36P16671 472 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 HLA-DMBP28068 263 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 TFPI2P48307 235 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 TMEM187Q14656 261 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 MFSD4AQ8N468 514 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 Q8NAQ8 132 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 TCTEX1D2Q8WW35 142 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 ANAPC16Q96DE5 110 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 RNF2Q99496 336 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 CHRDL1Q9BU40 450 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 KRTAP9-2Q9BYQ4 174 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 SPATA2Q9UM82 520 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 OR2W1Q9Y3N9 320 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 DNAH17Q9UFH2 4485 aa9.27□□□□□ -0.93
SCAF11-208ENST00000546534 IGKV1D-13A0A0B4J2D9 117 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 TMEM272A0A1B0GTI8 110 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 K7EMT4 169 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 M0R2N4 97 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 NDUFA4O00483 81 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 HLA-DQB1P01920 261 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 IGKV1-13P0DP09 117 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 HIST1H1DP16402 221 aaKnown RBP9.26□□□□□ -0.93
SCAF11-208ENST00000546534 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-208ENST00000546534 OR2B8PP59922 312 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 EIF4EBP1Q13541 118 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-208ENST00000546534 Q6ZS49 121 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 Q6ZTC4 211 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 NR2C2APQ86WQ0 139 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 OR10R2Q8NGX6 335 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 VN1R17PQ8TDU5 208 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 TMEM203Q969S6 136 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 S100A14Q9HCY8 104 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms