RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CPAMD8Q8IZJ3 1885 aa8.22□□□□□ -1.09
TRAF1-203ENST00000546084 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 DNPH1O43598 174 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 TNFSF4P23510 183 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 PAX9P55771 341 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 KLF3P57682 345 aaPredicted RBP8.21□□□□□ -1.09
TRAF1-203ENST00000546084 MRPS11P82912 194 aaKnown RBP8.21□□□□□ -1.09
TRAF1-203ENST00000546084 C21orf140B9A014 251 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 ITGB1BP1O14713 200 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 IGKV1-5P01602 117 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 AMBPP02760 352 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 ORM2P19652 201 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 ERVFC1-1P60608 527 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 HIST1H3AP68431 136 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 FXYD3Q14802 87 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 DUX4L9Q6RFH8 374 aaPredicted RBP8.21□□□□□ -1.09
TRAF1-203ENST00000546084 BHLHA15Q7RTS1 189 aaPredicted RBP8.21□□□□□ -1.09
TRAF1-203ENST00000546084 BCL2L2Q92843 193 aaPredicted RBP8.21□□□□□ -1.09
TRAF1-203ENST00000546084 AP1S3Q96PC3 154 aa8.21□□□□□ -1.09
TRAF1-203ENST00000546084 ZFHX4Q86UP3 3567 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 TRAV3A0A0B4J244 114 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 LYNX1G3V0Z9 82 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 GGCTO75223 188 aaKnown RBP8.21□□□□□ -1.1
TRAF1-203ENST00000546084 LYNX1P0DP58 116 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 MAS1LP35410 378 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 TNFSF10P50591 281 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 HCP5Q6MZN7 132 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 MRPL54Q6P161 138 aaKnown RBP8.21□□□□□ -1.1
TRAF1-203ENST00000546084 KCNIP4Q6PIL6 250 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 RBMXL3Q8N7X1 1067 aaKnown RBP8.21□□□□□ -1.1
TRAF1-203ENST00000546084 OR2T10Q8NGZ9 312 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 COMMD5Q9GZQ3 224 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 CXXC4Q9H2H0 198 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 ZDHHC11Q9H8X9 412 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 ZZEF1O43149 2961 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 KALRNO60229 2985 aa8.21□□□□□ -1.1
TRAF1-203ENST00000546084 IGHV3-35A0A0C4DH35 117 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 CDX4O14627 284 aaPredicted RBP8.2□□□□□ -1.1
TRAF1-203ENST00000546084 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
TRAF1-203ENST00000546084 ACP1P24666 158 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 ATP5G3P48201 142 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 YPEL4Q96NS1 127 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 DERL1Q9BUN8 251 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 CTDSP1Q9GZU7 261 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 PARLQ9H300 379 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 WIPI2Q9Y4P8 454 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 DUXBA0A1W2PPF3 345 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 F6UZH7 168 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 CAMPP49913 170 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 PSG5Q15238 335 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 ACOT6Q3I5F7 207 aaPredicted RBP8.2□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF664Q8N3J9 261 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 GMPPAQ96IJ6 420 aaPredicted RBP8.2□□□□□ -1.1
TRAF1-203ENST00000546084 IMMP2LQ96T52 175 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 SRD5A3Q9H8P0 318 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 TRGV10A0A0A0MS01 117 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 OOEPA6NGQ2 149 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 SLC17A3O00476 420 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 CNIH1O95406 144 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 GZMBP10144 247 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 PMCHP20382 165 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 MLANAQ16655 118 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 TMEM42Q69YG0 159 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 GFRALQ6UXV0 394 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF525Q8N782 197 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 IGFBPL1Q8WX77 278 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 NOL4LQ96MY1 436 aaPredicted RBP8.2□□□□□ -1.1
TRAF1-203ENST00000546084 TXN2Q99757 166 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 IL36GQ9NZH8 169 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 LRP4O75096 1905 aa8.2□□□□□ -1.1
TRAF1-203ENST00000546084 IGHV3OR16-8A0A075B7F1 116 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 A0A1B0GUS0 222 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 RRHO14718 337 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 SERF2P84101 59 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 JOSD1Q15040 202 aaPredicted RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 ZNF726P1Q15940 193 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 PEAR1Q5VY43 1037 aaPredicted RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 TCF23Q7RTU1 214 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 WDR86Q86TI4 376 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 UHRF2Q96PU4 802 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 PRRG2O14669 202 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 WT1P19544 449 aaPredicted RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 CD24P25063 80 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 OPRK1P41145 380 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 KRTDAPP60985 99 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 PAX5Q02548 391 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 ASCL4Q6XD76 172 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 MOB3BQ86TA1 216 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 TGIF2LYQ8IUE0 185 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 ODF3L1Q8IXM7 274 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 ALKBH7Q9BT30 221 aaPredicted RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 NDUFAF3Q9BU61 184 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
TRAF1-203ENST00000546084 RNF115Q9Y4L5 304 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 TRBV24-1A0A075B6N3 115 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 PIGBOS1A0A0B4J2F0 54 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 RAB29O14966 203 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 NAPSAO96009 420 aa8.19□□□□□ -1.1
TRAF1-203ENST00000546084 CD1BP29016 333 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms