RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	MITD1	Q8WV92	249 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	LSM10	Q969L4	123 aa	Known RBP	8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	NOL4L	Q96MY1	436 aa	Predicted RBP	8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	FAM103A1	Q9BTL3	118 aa	Known RBP	8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	PDCD10	Q9BUL8	212 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	C19orf24	Q9BVV8	132 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	C16orf95	Q9H693	158 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	CACNG5	Q9UF02	275 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	RNF114	Q9Y508	228 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	WSB1	Q9Y6I7	421 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545	ZFHX3	Q15911	3703 aa		8.03	□□□□□ -1.12
CPSF7-221	ENST00000543545		A0A0B4J293	547 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545		A0A0G2JRQ6	117 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	C13orf42	A0A1B0GVH6	325 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	DUXB	A0A1W2PPF3	345 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	CLPSL1	A2RUU4	121 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	MSGN1	A6NI15	193 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	ATP6V0E1	O15342	81 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	ADAP1	O75689	374 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	IFNA17	P01571	189 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	APELA	P0DMC3	54 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	SULT1A3	P0DMM9	295 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	SULT1A4	P0DMN0	295 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	MDK	P21741	143 aa	Predicted RBP	8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	COMP	P49747	757 aa	Predicted RBP	8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	NDP	Q00604	133 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	OXA1L	Q15070	435 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	TATDN3	Q17R31	274 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	C10orf55	Q5SWW7	151 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	GGNBP1	Q5YKI7	109 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	UNQ5815/PRO19632	Q6UWF5	114 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	CADM3	Q8N126	398 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545		Q8N2B8	174 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	LRTM2	Q8N967	370 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	MINDY2	Q8NBR6	621 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR1L8	Q8NGR8	309 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR1S1	Q8NH92	325 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	LINC01006	Q8NI28	216 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	SRSF12	Q8WXF0	261 aa	Known RBP	8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	SPIN2A	Q99865	258 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	SPIN2B	Q9BPZ2	258 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	TMED3	Q9Y3Q3	217 aa		8.02	□□□□□ -1.13
CPSF7-221	ENST00000543545	TRAV41	A0A0B4J266	112 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	TEX50	A0A1B0GTY4	177 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545		A0A1B0GU03	582 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545		A0A1B0GUS0	222 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	C5orf51	A6NDU8	294 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	HMX3	A6NHT5	357 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	C15orf61	A6NNL5	157 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	SNRPGP15	A8MWD9	76 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	NXPH3	O95157	252 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	IL6R	P08887	468 aa	Predicted RBP	8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	TRAPPC2	P0DI81	140 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	TRAPPC2B	P0DI82	140 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	HSPE1	P61604	102 aa	Known RBP	8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	SLC35B1	P78383	322 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	SMCO1	Q147U7	214 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	MRGPRG-AS1	Q2M3A8	158 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	NMS	Q5H8A3	153 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545		Q6ZRM9	215 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	STPG2	Q8N412	459 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	LFNG	Q8NES3	379 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR5B3	Q8NH48	314 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	CHPT1	Q8WUD6	406 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	QTRT1	Q9BXR0	403 aa	Known RBP	8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	GON7	Q9BXV9	100 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	ENY2	Q9NPA8	101 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	SERTAD4	Q9NUC0	356 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	GSKIP	Q9P0R6	139 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	FOXA2	Q9Y261	457 aa	Predicted RBP	8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	ALG5	Q9Y673	324 aa		8.01	□□□□□ -1.13
CPSF7-221	ENST00000543545	TMEM89	A2RUT3	159 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	PSMB11	A5LHX3	300 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	DBX1	A6NMT0	343 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	CEBPZOS	A8MTT3	80 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545		G3V318	75 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	CCS	O14618	274 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	ST8SIA3	O43173	380 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	IGF1	P05019	195 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545		P0C879	139 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	EGR2	P11161	476 aa	Predicted RBP	8	□□□□□ -1.13
CPSF7-221	ENST00000543545	HOXA1	P49639	335 aa	Predicted RBP	8	□□□□□ -1.13
CPSF7-221	ENST00000543545	SPINK9	Q5DT21	86 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	ZNF329	Q86UD4	541 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	MRPL41	Q8IXM3	137 aa	Known RBP	8	□□□□□ -1.13
CPSF7-221	ENST00000543545	KLHDC1	Q8N7A1	406 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR5T1	Q8NG75	326 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	SGMS2	Q8NHU3	365 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	PLEKHA3	Q9HB20	300 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	ZNF355P	Q9NSJ1	428 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	TMEM14B	Q9NUH8	114 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	FBXO7	Q9Y3I1	522 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545	C2CD3	Q4AC94	2353 aa		8	□□□□□ -1.13
CPSF7-221	ENST00000543545		A0A1W2PN81	502 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545		E7EUB6	86 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	GOSR2	O14653	212 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	FGF2	P09038	288 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	CHRNA7	P36544	502 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	SPCS3	P61009	180 aa		7.99	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms