RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PPP1R1AQ13522 171 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 POU2AF1Q16633 256 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 C10orf55Q5SWW7 151 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 C10orf99Q6UWK7 81 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 SLC25A42Q86VD7 318 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 LGI3Q8N145 548 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 COMMD1Q8N668 190 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 OR5T1Q8NG75 326 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 RBPMSQ93062 196 aaKnown RBP4.97□□□□□ -1.61
LTBR-212ENST00000543542 SEC22AQ96IW7 307 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 MS4A10Q96PG2 267 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 WNT10AQ9GZT5 417 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 ENY2Q9NPA8 101 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 NUDT15Q9NV35 164 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 FKBP11Q9NYL4 201 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 PRR13Q9NZ81 148 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 PRNDQ9UKY0 176 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 TBC1D24Q9ULP9 559 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 FOXA2Q9Y261 457 aaPredicted RBP4.97□□□□□ -1.61
LTBR-212ENST00000543542 FBXO7Q9Y3I1 522 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 OR51B2Q9Y5P1 312 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 NUBP2Q9Y5Y2 271 aa4.97□□□□□ -1.61
LTBR-212ENST00000543542 TET2Q6N021 2002 aaPredicted RBP4.97□□□□□ -1.61
LTBR-212ENST00000543542 TEX50A0A1B0GTY4 177 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 HMX3A6NHT5 357 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 M0QZ24 198 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 CYB5BO43169 146 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 SFT2D2O95562 160 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 CDS2O95674 445 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 DHFRP00374 187 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 IGKV1-39P01597 117 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 TRGV3P03979 118 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 IGKV1D-39P04432 117 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 REG1AP05451 166 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 ELANEP08246 267 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 HOXB5P09067 269 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 OR4E1P0C645 316 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 TRAPPC2P0DI81 140 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 TRAPPC2BP0DI82 140 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 DEFA4P12838 97 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 MYOD1P15172 320 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 SLC6A1P30531 599 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 TPPP2P59282 170 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 KRTAP10-3P60369 221 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 UBE2MP61081 183 aaKnown RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 IFITM3Q01628 133 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 TMEM187Q14656 261 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 AKIRIN2Q53H80 203 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 HIST2H2BDQ6DRA6 164 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 THOC7Q6I9Y2 204 aaKnown RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 PLET1Q6UQ28 207 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 FAM219AQ8IW50 185 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 MRPL41Q8IXM3 137 aaKnown RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 SELENOHQ8IZQ5 122 aaKnown RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 SLC35G3Q8N808 338 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 UXS1Q8NBZ7 420 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 KLHL30-AS1Q8NEE0 82 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 OR5M8Q8NGP6 311 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 OR1L8Q8NGR8 309 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 COQ8AQ8NI60 647 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 GLYATL2Q8WU03 294 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 IL22RA2Q969J5 263 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 GALNT14Q96FL9 552 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 TMEM56Q96MV1 263 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 CITED1Q99966 193 aa4.96□□□□□ -1.62
LTBR-212ENST00000543542 CITED2Q99967 270 aaPredicted RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 QTRT1Q9BXR0 403 aaKnown RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 TSSC4Q9Y5U2 329 aaPredicted RBP4.96□□□□□ -1.62
LTBR-212ENST00000543542 A0A0B4J2A0 478 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 C13orf42A0A1B0GVH6 325 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 C9orf170A2RU37 121 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 C15orf61A6NNL5 157 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 CEBPZOSA8MTT3 80 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 NXPH3O95157 252 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 IFNA21P01568 189 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 IGKV1-5P01602 117 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 IGHG4P01861 327 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 RPLP1P05386 114 aaKnown RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 FGF2P09038 288 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 SULT1A3P0DMM9 295 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 SULT1A4P0DMN0 295 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 EGR2P11161 476 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 HOXA1P49639 335 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 CRIP2P52943 208 aaPredicted RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 SUPT4H1P63272 117 aaKnown RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 ERHP84090 104 aaKnown RBP4.95□□□□□ -1.62
LTBR-212ENST00000543542 FOXE3Q13461 319 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 IZUMO4Q1ZYL8 232 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 MRGPRG-AS1Q2M3A8 158 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 C2orf68Q2NKX9 166 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 SPINK9Q5DT21 86 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 LCNL1Q6ZST4 164 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 LYZL2Q7Z4W2 148 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 NRARPQ7Z6K4 114 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 LYG2Q86SG7 212 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 NDUFA11Q86Y39 141 aa4.95□□□□□ -1.62
LTBR-212ENST00000543542 OR5B3Q8NH48 314 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms