RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 WNT10AQ9GZT5 417 aa19.64■□□□□ 0.73
SHD-201ENST00000543264 RNASE7Q9H1E1 156 aaKnown RBP19.64■□□□□ 0.73
SHD-201ENST00000543264 NPVFQ9HCQ7 196 aa19.64■□□□□ 0.73
SHD-201ENST00000543264 TET2Q6N021 2002 aaPredicted RBP19.64■□□□□ 0.73
SHD-201ENST00000543264 TRAV34A0A0B4J273 112 aa19.64■□□□□ 0.73
SHD-201ENST00000543264 GFRA3O60609 400 aa19.64■□□□□ 0.73
SHD-201ENST00000543264 VDAC2P45880 294 aaPredicted RBP19.64■□□□□ 0.73
SHD-201ENST00000543264 NANOS1Q8WY41 292 aaKnown RBP19.64■□□□□ 0.73
SHD-201ENST00000543264 LNP1A1A4G5 178 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 NTN3O00634 580 aaPredicted RBP19.63■□□□□ 0.73
SHD-201ENST00000543264 PROP1O75360 226 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 HYPMO75409 117 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 NDUFB8O95169 186 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 MT-CO2P00403 227 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 GPR12P47775 334 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 GNG4P50150 75 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 ZNF83P51522 516 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 FBXW9Q5XUX1 488 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 STPG3Q8N7X2 389 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 C11orf52Q96A22 123 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 HELTA6NFD8 242 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 ACTL6BO94805 426 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 OR5G3P0C626 314 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 IGLC2P0DOY2 106 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 IGLC3P0DOY3 106 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 DUTP33316 252 aaKnown RBP19.63■□□□□ 0.73
SHD-201ENST00000543264 HNRNPA3P51991 378 aaKnown RBP19.63■□□□□ 0.73
SHD-201ENST00000543264 CENPWQ5EE01 88 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 PQLC2Q6ZP29 291 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 KCNS1Q96KK3 526 aa19.63■□□□□ 0.73
SHD-201ENST00000543264 FAM19A2Q8N3H0 131 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 Q8TCH9 128 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 TTTY12Q9BZ98 90 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 HES4Q9HCC6 221 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 TUBG2Q9NRH3 451 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 LAMTOR2Q9Y2Q5 125 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 LY96Q9Y6Y9 160 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 IGHV3-13P01766 116 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 IGHV3-7P01780 117 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 TDGF1P13385 188 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 CRYBB3P26998 211 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 TMPRSS3P57727 454 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 TMEM136Q6ZRR5 245 aa19.62■□□□□ 0.73
SHD-201ENST00000543264 SRIP30626 198 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 CX3CL1P78423 397 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 PLGLB1Q02325 96 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 OR10J3Q5JRS4 329 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 CT55Q8WUE5 264 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 LSM4Q9Y4Z0 139 aaKnown RBP19.61■□□□□ 0.73
SHD-201ENST00000543264 C20orf202A1L168 122 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 C3orf79P0CE67 100 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 SSPNQ14714 243 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 MRPL54Q6P161 138 aaKnown RBP19.61■□□□□ 0.73
SHD-201ENST00000543264 WDR73Q6P4I2 378 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 ATOH7Q8N100 152 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 TMEM251Q8N6I4 163 aa19.61■□□□□ 0.73
SHD-201ENST00000543264 RPL19P84098 196 aaKnown RBP19.6■□□□□ 0.73
SHD-201ENST00000543264 MRPL49Q13405 166 aaKnown RBP19.6■□□□□ 0.73
SHD-201ENST00000543264 TEPPQ6URK8 271 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 CDX2Q99626 313 aaPredicted RBP19.6■□□□□ 0.73
SHD-201ENST00000543264 ASCL3Q9NQ33 180 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 PCSK5Q92824 1860 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 PTPRBP23467 1997 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 AHCTF1Q8WYP5 2266 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 DPRXA6NFQ7 191 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 M0R1X1 148 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 MT-ND6P03923 174 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 EDDM3AQ14507 147 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 MIR17HGQ75NE6 70 aa19.6■□□□□ 0.73
SHD-201ENST00000543264 TIPARPQ7Z3E1 657 aaKnown RBP19.6■□□□□ 0.73
SHD-201ENST00000543264 YLPM1P49750 1951 aaKnown RBP19.59■□□□□ 0.73
SHD-201ENST00000543264 SPINT2O43291 252 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 ZNF324O75467 553 aaPredicted RBP19.59■□□□□ 0.73
SHD-201ENST00000543264 NTF3P20783 257 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 MPV17P39210 176 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 ERVK-16P61578 105 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 PSG5Q15238 335 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 AARDQ4LEZ3 155 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 ACP7Q6ZNF0 438 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 C11orf53Q8IXP5 236 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 PTTG1IPP53801 180 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 RELBQ01201 579 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 ABHD17BQ5VST6 288 aa19.59■□□□□ 0.73
SHD-201ENST00000543264 SAA2-SAA4A0A096LPE2 208 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 GNG10P50151 68 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 PRRX1P54821 245 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 GABRA6Q16445 453 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 GCNT2Q8N0V5 402 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 GNG12Q9UBI6 72 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 PILRBQ9UKJ0 227 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 TCF19Q9Y242 345 aa19.58■□□□□ 0.73
SHD-201ENST00000543264 RPL39P5Q59GN2 51 aa19.58■□□□□ 0.72
SHD-201ENST00000543264 Q6ZVH6 145 aa19.58■□□□□ 0.72
SHD-201ENST00000543264 NIT1Q86X76 327 aa19.58■□□□□ 0.72
SHD-201ENST00000543264 IQCF6A8MYZ5 107 aa19.57■□□□□ 0.72
SHD-201ENST00000543264 BMPR1BO00238 502 aa19.57■□□□□ 0.72
SHD-201ENST00000543264 CCL25O15444 150 aa19.57■□□□□ 0.72
SHD-201ENST00000543264 LINC00696Q6ZRV3 163 aa19.57■□□□□ 0.72
SHD-201ENST00000543264 OR52E5Q8NH55 327 aa19.57■□□□□ 0.72
SHD-201ENST00000543264 SERTAD4Q9NUC0 356 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms