RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 AADACP22760 399 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 DUSP1P28562 367 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 S100GP29377 79 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 PRDX2P32119 198 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 GPM6AP51674 278 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 EDDM3BP56851 147 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 BTN1A1Q13410 526 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 HNF4GQ14541 408 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 IL34Q6ZMJ4 242 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 SLC35E3Q7Z769 313 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 ZNF573Q86YE8 665 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 COMMD1Q8N668 190 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 BPIFCQ8NFQ6 507 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 NARS2Q96I59 477 aaKnown RBP7.53□□□□□ -1.2
CHFR-220ENST00000541817 TAF9BQ9HBM6 251 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 Q9N2K0 584 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 OR14J1Q9UGF5 321 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 DSCAML1Q8TD84 2053 aa7.53□□□□□ -1.2
CHFR-220ENST00000541817 PKHD1P08F94 4074 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 MSGN1A6NI15 193 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 ZNF705EA8MWA4 302 aaPredicted RBP7.52□□□□□ -1.21
CHFR-220ENST00000541817 TRDCB7Z8K6 153 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 PPYP01298 95 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 GAPDHP04406 335 aaKnown RBP7.52□□□□□ -1.21
CHFR-220ENST00000541817 PRKACAP17612 351 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 NPBWR2P48146 333 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 SLURP1P55000 103 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 RND3P61587 244 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 GNB1P62873 340 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 GNG3P63215 75 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 DEFA5Q01523 94 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 IL13RA2Q14627 380 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 SP6Q3SY56 376 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 TCF23Q7RTU1 214 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 OR1N2Q8NGR9 330 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 TMED6Q8WW62 240 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 HPSE2Q8WWQ2 592 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 OR5P3Q8WZ94 311 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 DLX4Q92988 240 aaPredicted RBP7.52□□□□□ -1.21
CHFR-220ENST00000541817 SPIN2AQ99865 258 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 SPIN2BQ9BPZ2 258 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 CLEC7AQ9BXN2 247 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 PKIBQ9C010 78 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 HIPK2Q9H2X6 1198 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 GNB4Q9HAV0 340 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 RHOFQ9HBH0 211 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 SLC2A9Q9NRM0 540 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 DPM3Q9P2X0 92 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 UBE2J1Q9Y385 318 aaPredicted RBP7.52□□□□□ -1.21
CHFR-220ENST00000541817 TMED3Q9Y3Q3 217 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 TNCP24821 2201 aa7.52□□□□□ -1.21
CHFR-220ENST00000541817 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 DUXBA0A1W2PPF3 345 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 A8MZ25 164 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 C12orf77C9JDV5 145 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 M0QZK8 103 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 GPR31O00270 319 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 TSPAN4O14817 238 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 MPPED1O15442 326 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 ST8SIA3O43173 380 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 PVALBP20472 110 aaPredicted RBP7.51□□□□□ -1.21
CHFR-220ENST00000541817 P2RY1P47900 373 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 PJVKQ0ZLH3 352 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 IL24Q13007 206 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 GNMTQ14749 295 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 SPIN3Q5JUX0 258 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 RPL7L1Q6DKI1 246 aaKnown RBP7.51□□□□□ -1.21
CHFR-220ENST00000541817 FAM58AQ8N1B3 248 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 TPRX1Q8N7U7 411 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 TMEM133Q9H2Q1 129 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 TREM1Q9NP99 234 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 ZNF581Q9P0T4 197 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 RCC2Q9P258 522 aaKnown RBP7.51□□□□□ -1.21
CHFR-220ENST00000541817 VPS13DQ5THJ4 4388 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 HERC1Q15751 4861 aa7.51□□□□□ -1.21
CHFR-220ENST00000541817 TRBV6-6A0A0A6YYG2 114 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 TMEM218A2RU14 115 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 TMEM210A6NLX4 147 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 MED6O75586 246 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 CDS2O95674 445 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 IGHG2P01859 326 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CHFR-220ENST00000541817 OR8U8P0C7N1 319 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 SULT1A2P50226 295 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 ZNF616Q08AN1 781 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 HES1Q14469 280 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 EDDM3AQ14507 147 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 HAGHLQ6PII5 290 aaPredicted RBP7.5□□□□□ -1.21
CHFR-220ENST00000541817 LYZL2Q7Z4W2 148 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 Q8IYB0 196 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 CMTM1Q8IZ96 169 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 SVBPQ8N300 66 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 ZNF561Q8N587 486 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 LHFPL5Q8TAF8 219 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 SECTM1Q8WVN6 248 aa7.5□□□□□ -1.21
CHFR-220ENST00000541817 ARPC1AQ92747 370 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 3154.4 ms