RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 ZADH2Q8N4Q0 377 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 SGMS2Q8NHU3 365 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 SCGB1D1O95968 90 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 CISD2Q8N5K1 135 aaKnown RBP11.19□□□□□ -0.62
PTPN1-202ENST00000541713 TMEM210A6NLX4 147 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 C17orf112F2Z3M2 114 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 ENSAO43768 121 aaKnown RBP11.19□□□□□ -0.62
PTPN1-202ENST00000541713 FAM90A1Q86YD7 464 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
PTPN1-202ENST00000541713 TET2Q6N021 2002 aaPredicted RBP11.18□□□□□ -0.62
PTPN1-202ENST00000541713 A0A1B0GW64 132 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 RAB29O14966 203 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 CA2P00918 260 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 CGAP01215 116 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 MGST1P10620 155 aaKnown RBP11.18□□□□□ -0.62
PTPN1-202ENST00000541713 TMEM256Q8N2U0 113 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 C15orf65H3BRN8 121 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 DIAPH2-AS1Q14236 149 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 MGST2Q99735 147 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 FAM103A1Q9BTL3 118 aaKnown RBP11.18□□□□□ -0.62
PTPN1-202ENST00000541713 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 PMS2P5A8MQ11 134 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 RBFOX2O43251 390 aaKnown RBP eCLIP11.18□□□□□ -0.624e-7■■■□□ 15.2
PTPN1-202ENST00000541713 IGHV2-70P01814 119 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 RNF224P0DH78 156 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 CBLN1P23435 193 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 CTAG1AP78358 180 aa11.18□□□□□ -0.62
PTPN1-202ENST00000541713 A0A087WWC5 75 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 A0A1B0GV90 55 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
PTPN1-202ENST00000541713 LYNX1G3V0Z9 82 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
PTPN1-202ENST00000541713 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
PTPN1-202ENST00000541713 LYNX1P0DP58 116 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 CHRNB4P30926 498 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 OR4A47Q6IF82 309 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 MIR17HGQ75NE6 70 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 PNRC1Q12796 327 aaPredicted RBP11.17□□□□□ -0.62
PTPN1-202ENST00000541713 PSG5Q15238 335 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 DOLPP1Q86YN1 238 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 MALSU1Q96EH3 234 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 CIB3Q96Q77 187 aaPredicted RBP11.17□□□□□ -0.62
PTPN1-202ENST00000541713 TRAPPC1Q9Y5R8 145 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 F6UZH7 168 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 CA1P00915 261 aaPredicted RBP11.17□□□□□ -0.62
PTPN1-202ENST00000541713 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 UHRF2Q96PU4 802 aa11.17□□□□□ -0.62
PTPN1-202ENST00000541713 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 TRAV1-1A0A0B4J248 108 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 NPIPB11E5RHQ5 1161 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 MGST3O14880 152 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 KITLGP21583 273 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 SELENOVP59797 346 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 PRR27Q6MZM9 219 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 DPPA3Q6W0C5 159 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 PPP1R35Q8TAP8 253 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 YTHDF2Q9Y5A9 579 aaKnown RBP11.16□□□□□ -0.62
PTPN1-202ENST00000541713 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 MDFIC2A0A1B0GVS7 189 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 HPRT1P00492 218 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 AMBPP02760 352 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 NPY1RP25929 384 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 ZNF90Q03938 601 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 STPG3Q8N7X2 389 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 TMEM170AQ8WVE7 144 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 NEUROG1Q92886 237 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 HES4Q9HCC6 221 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 ASCL3Q9NQ33 180 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 SLC25A15Q9Y619 301 aa11.16□□□□□ -0.62
PTPN1-202ENST00000541713 A0A087X0M5 115 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 TRGV10A0A0A0MS01 117 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 A0A1B0GX30 115 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 NUPR1O60356 82 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 RPL31P62899 125 aaKnown RBP11.15□□□□□ -0.62
PTPN1-202ENST00000541713 ARSJQ5FYB0 599 aaPredicted RBP11.15□□□□□ -0.62
PTPN1-202ENST00000541713 KIR3DL3Q8N743 410 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 OR9G1Q8NH87 305 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 LINC00479Q96M42 142 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 TIMM8BQ9Y5J9 83 aaPredicted RBP11.15□□□□□ -0.62
PTPN1-202ENST00000541713 A0A1W2PRD5 423 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 A0A1W2PRF3 423 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 A0A1W2PRM7 423 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
PTPN1-202ENST00000541713 J3QR06 171 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 GFRA3O60609 400 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 PFN1P07737 140 aaKnown RBP11.15□□□□□ -0.62
PTPN1-202ENST00000541713 IL3RAP26951 378 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 CRYBB3P26998 211 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 PLEKHA3Q9HB20 300 aa11.15□□□□□ -0.62
PTPN1-202ENST00000541713 SRRM5B3KS81 715 aa11.15□□□□□ -0.63
PTPN1-202ENST00000541713 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.63
PTPN1-202ENST00000541713 BATFQ16520 125 aa11.15□□□□□ -0.63
PTPN1-202ENST00000541713 OR1P1Q8NH06 330 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms