RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CFDP00746 253 aaPredicted RBP22.3■■□□□ 1.16
CCM2-218ENST00000541586 SAA4P35542 130 aa22.3■■□□□ 1.16
CCM2-218ENST00000541586 RPL23AP62750 156 aaKnown RBP22.3■■□□□ 1.16
CCM2-218ENST00000541586 ZNF429Q86V71 674 aa22.3■■□□□ 1.16
CCM2-218ENST00000541586 RITA1Q96K30 269 aa22.3■■□□□ 1.16
CCM2-218ENST00000541586 BET1LQ9NYM9 111 aa22.3■■□□□ 1.16
CCM2-218ENST00000541586 UPK2O00526 184 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 TIMM23O14925 209 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 IGLV2-23P01705 113 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 EWSR1Q01844 656 aaKnown RBP eCLIP22.29■■□□□ 1.16
CCM2-218ENST00000541586 OR8H3Q8N146 312 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 TMEM252Q8N6L7 170 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 C17orf50Q8WW18 174 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 ZDHHC16Q969W1 377 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 BSCL2Q96G97 398 aaPredicted RBP22.29■■□□□ 1.16
CCM2-218ENST00000541586 SMIM8Q96KF7 97 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 ZNF471Q9BX82 626 aaPredicted RBP22.29■■□□□ 1.16
CCM2-218ENST00000541586 TMEM14BQ9NUH8 114 aa22.29■■□□□ 1.16
CCM2-218ENST00000541586 H3BP45 60 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 IFNA17P01571 189 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 PAX6P26367 422 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 NHLH2Q02577 135 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 SPINK9Q5DT21 86 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 ZNF680Q8NEM1 530 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 OR52E5Q8NH55 327 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 SLC25A31Q9H0C2 315 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 CYTL1Q9NRR1 136 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 PSENENQ9NZ42 101 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 FOXA2Q9Y261 457 aaPredicted RBP22.28■■□□□ 1.16
CCM2-218ENST00000541586 TAS2R30P59541 319 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 SPCS3P61009 180 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 SSX2Q16385 188 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 DTD1Q8TEA8 209 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 FBXL17Q9UF56 701 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 FAM96BQ9Y3D0 163 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 TBL2Q9Y4P3 447 aaKnown RBP22.28■■□□□ 1.16
CCM2-218ENST00000541586 NAV3Q8IVL0 2385 aa22.28■■□□□ 1.16
CCM2-218ENST00000541586 FN1P02751 2386 aaKnown RBP22.27■■□□□ 1.16
CCM2-218ENST00000541586 CEBPZOSA8MTT3 80 aa22.27■■□□□ 1.16
CCM2-218ENST00000541586 KBTBD11O94819 623 aa22.27■■□□□ 1.16
CCM2-218ENST00000541586 SPDEFO95238 335 aa22.27■■□□□ 1.16
CCM2-218ENST00000541586 LGALS7P47929 136 aa22.27■■□□□ 1.16
CCM2-218ENST00000541586 BPIFB3P59826 476 aa22.27■■□□□ 1.16
CCM2-218ENST00000541586 PDLIM3Q53GG5 364 aaPredicted RBP22.27■■□□□ 1.16
CCM2-218ENST00000541586 DYNAPQ8N1N2 210 aa22.27■■□□□ 1.16
CCM2-218ENST00000541586 A0A0U1RQK1 487 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 TAAR5O14804 337 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 CRLF1O75462 422 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 CFHR4Q92496 578 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 SMIM3Q9BZL3 60 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 CACFD1Q9UGQ2 172 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 PRNDQ9UKY0 176 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 CUBNO60494 3623 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 OOSP1A8MZH6 123 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 HABP2Q14520 560 aaPredicted RBP22.26■■□□□ 1.15
CCM2-218ENST00000541586 CCDC144NLQ6NUI1 221 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 ZNF767PQ75MW2 155 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 VSTM2AQ8TAG5 236 aa22.26■■□□□ 1.15
CCM2-218ENST00000541586 MXRA5Q9NR99 2828 aa22.25■■□□□ 1.15
CCM2-218ENST00000541586 CD1BP29016 333 aa22.25■■□□□ 1.15
CCM2-218ENST00000541586 UBA52P62987 128 aaKnown RBP22.25■■□□□ 1.15
CCM2-218ENST00000541586 EXOSC2Q13868 293 aaKnown RBP22.25■■□□□ 1.15
CCM2-218ENST00000541586 ST8SIA2Q92186 375 aa22.25■■□□□ 1.15
CCM2-218ENST00000541586 TCF19Q9Y242 345 aa22.25■■□□□ 1.15
CCM2-218ENST00000541586 OR51B2Q9Y5P1 312 aa22.25■■□□□ 1.15
CCM2-218ENST00000541586 NSD1Q96L73 2696 aaPredicted RBP22.25■■□□□ 1.15
CCM2-218ENST00000541586 MDFIC2A0A1B0GVS7 189 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 CST7O76096 145 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 VENTXO95231 258 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 MYOD1P15172 320 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 VMA21Q3ZAQ7 101 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 SPANXN5Q5MJ07 72 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 OR4A5Q8NH83 315 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 AJUBAQ96IF1 538 aa22.24■■□□□ 1.15
CCM2-218ENST00000541586 CIB3Q96Q77 187 aaPredicted RBP22.24■■□□□ 1.15
CCM2-218ENST00000541586 TET2Q6N021 2002 aaPredicted RBP22.24■■□□□ 1.15
CCM2-218ENST00000541586 SLC25A17O43808 307 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 IFNA7P01567 189 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 HSPE1P61604 102 aaKnown RBP22.23■■□□□ 1.15
CCM2-218ENST00000541586 BAXQ07812 192 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 TMEM267Q0VDI3 215 aaPredicted RBP22.23■■□□□ 1.15
CCM2-218ENST00000541586 DEFB112Q30KQ8 113 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 TMEM167AQ8TBQ9 72 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 CNTFRP26992 372 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 MALSU1Q96EH3 234 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 ZNF257Q9Y2Q1 563 aa22.23■■□□□ 1.15
CCM2-218ENST00000541586 RPL7L1Q6DKI1 246 aaKnown RBP22.22■■□□□ 1.15
CCM2-218ENST00000541586 STX12Q86Y82 276 aa22.22■■□□□ 1.15
CCM2-218ENST00000541586 STOML3Q8TAV4 291 aa22.22■■□□□ 1.15
CCM2-218ENST00000541586 WFDC1Q9HC57 220 aa22.22■■□□□ 1.15
CCM2-218ENST00000541586 FKBP11Q9NYL4 201 aa22.22■■□□□ 1.15
CCM2-218ENST00000541586 SULT1A1P50225 295 aa22.21■■□□□ 1.15
CCM2-218ENST00000541586 RPL8P62917 257 aaKnown RBP22.21■■□□□ 1.15
CCM2-218ENST00000541586 SCGB2A2Q13296 93 aa22.21■■□□□ 1.15
CCM2-218ENST00000541586 TMEM217Q8N7C4 229 aa22.21■■□□□ 1.15
CCM2-218ENST00000541586 TSNAXQ99598 290 aaKnown RBP22.21■■□□□ 1.15
CCM2-218ENST00000541586 RNF5Q99942 180 aa22.21■■□□□ 1.15
CCM2-218ENST00000541586 TPSG1Q9NRR2 321 aa22.21■■□□□ 1.15
CCM2-218ENST00000541586 PAIP2BQ9ULR5 123 aaKnown RBP22.21■■□□□ 1.15
CCM2-218ENST00000541586 METTL15P1P0C7V9 234 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms