RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SP1P08047 785 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR10J4P0C629 311 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 PRB4P10163 310 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 KRTDAPP60985 99 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 VWC2Q2TAL6 325 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 VWA1Q6PCB0 445 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 MIR17HGQ75NE6 70 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 BAGE2Q86Y30 109 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 ST6GALNAC3Q8NDV1 305 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR1L6Q8NGR2 347 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR4A16Q8NH70 328 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 DUSP13Q9UII6 198 aa8.57□□□□□ -1.04
CDC42SE1-207ENST00000540998 DYSFO75923 2080 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 LRBAP50851 2863 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 TRAV34A0A0B4J273 112 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 KIR2DL5BA0A0G2JN68 375 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 KIR2DL5BA0A0G2JPC4 375 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 SNURFLB1AK76 121 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 FCN1O00602 326 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 IGFBP2P18065 325 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 CCKARP32238 428 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 DUTP33316 252 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 TRIP6Q15654 476 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 TPTE2P1Q5T6R2 138 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 KIR2DL5AQ8N109 375 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 PDE6DO43924 150 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 GFRA3O60609 400 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 IL6RP08887 468 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 CRISP2P16562 243 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 RAB4AP20338 218 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 TNFSF10P50591 281 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 DUSP3P51452 185 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 MSMPQ1L6U9 139 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 DBX2Q6ZNG2 339 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 Q8IYB0 196 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 LRRC29Q8WV35 223 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 SAMD10Q9BYL1 202 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 KCNIP2Q9NS61 270 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 TMEM106BQ9NUM4 274 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 FBXL7Q9UJT9 491 aa8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 ASH1LQ9NR48 2969 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-207ENST00000540998 PMCHP20382 165 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 LCN2P80188 198 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 EFNB3Q15768 340 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 MAJINQ3KP22 176 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 MRPL54Q6P161 138 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 FAM19A2Q8N3H0 131 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 STPG3Q8N7X2 389 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TRIB1Q96RU8 372 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TMEM208Q9BTX3 173 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TMEM140Q9NV12 185 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 C15orf65H3BRN8 121 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TMPRSS2O15393 492 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 CER1O95813 267 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 STAG3L2P0CL84 134 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 STAG3L3P0CL85 134 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 CRYBB3P26998 211 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 GCHFRP30047 84 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 VHLLQ6RSH7 139 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR2Z1Q8NG97 314 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 SNRNP40Q96DI7 357 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 LINC00479Q96M42 142 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 UHRF2Q96PU4 802 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TAAR6Q96RI8 345 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 LRFN3Q9BTN0 628 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 HES4Q9HCC6 221 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 AKAP13Q12802 2813 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TRGV5A0A0B4J1U4 118 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 TMEM210A6NLX4 147 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 YPEL1O60688 119 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 OR10J1P30954 320 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 ZNF718Q3SXZ3 478 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 SLC35E4Q6ICL7 350 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 NANOS1Q8WY41 292 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 CIB3Q96Q77 187 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 YPEL2Q96QA6 119 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 HSD17B10Q99714 261 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 GNB4Q9HAV0 340 aa8.55□□□□□ -1.04
CDC42SE1-207ENST00000540998 IQCF6A8MYZ5 107 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 COMPP49747 757 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 GNG10P50151 68 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 DHRS13Q6UX07 377 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 PQLC2Q6ZP29 291 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 SSBP3Q9BWW4 388 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 WNT10AQ9GZT5 417 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 GCM1Q9NP62 436 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 TCF19Q9Y242 345 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 COL27A1Q8IZC6 1860 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 PRSS46E5RG02 174 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 LAMTOR5O43504 91 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 VDAC2P45880 294 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 RELBQ01201 579 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 FOXL1Q12952 345 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 HES3Q5TGS1 186 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 MMD2Q8IY49 270 aa8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 CDX2Q99626 313 aaPredicted RBP8.54□□□□□ -1.04
CDC42SE1-207ENST00000540998 ARRDC1-AS1Q9H2J1 176 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms