RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PSENENQ9NZ42 101 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 FBXL17Q9UF56 701 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 ZNF257Q9Y2Q1 563 aa6.79□□□□□ -1.32
CHD4-208ENST00000540960 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 CEBPZOSA8MTT3 80 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 B4DSR2 109 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 M0R1W7 72 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 TIMM23O14925 209 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 CFDP00746 253 aaPredicted RBP6.78□□□□□ -1.32
CHD4-208ENST00000540960 IGKV1-5P01602 117 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 NMBP08949 121 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 OR8U8P0C7N1 319 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 P0C879 139 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 GPR6P46095 362 aaPredicted RBP6.78□□□□□ -1.32
CHD4-208ENST00000540960 LGALS7P47929 136 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 SULT1A2P50226 295 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 RAB11AP62491 216 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 ZNF816Q0VGE8 651 aaPredicted RBP6.78□□□□□ -1.32
CHD4-208ENST00000540960 NCR3LG1Q68D85 454 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 ZNF833PQ6ZTB9 187 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 COMMD7Q86VX2 200 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 PDPNQ86YL7 162 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 SLC7A5P1Q8MH63 180 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 BEND2Q8NDZ0 799 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 OR13D1Q8NGV5 346 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 UBALD1Q8TB05 177 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 ATP5SQ99766 215 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 RNF5Q99942 180 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 ZNF251Q9BRH9 671 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 PARP12Q9H0J9 701 aaKnown RBP6.78□□□□□ -1.32
CHD4-208ENST00000540960 TMEM133Q9H2Q1 129 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 C11orf1Q9H5F2 150 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 PARP11Q9NR21 331 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 CYTL1Q9NRR1 136 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 NUP50Q9UKX7 468 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 FBXO7Q9Y3I1 522 aa6.78□□□□□ -1.32
CHD4-208ENST00000540960 ARHGAP32A7KAX9 2087 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 SAA2-SAA4A0A096LPE2 208 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 PPIAL4CA0A0B4J2A2 164 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 RPS10-NUDT3A0A1W2PQS6 291 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 MSGN1A6NI15 193 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 OOSP1A8MZH6 123 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 J3QR06 171 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 FGF16O43320 207 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 S1PR2O95136 353 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 IFNA17P01571 189 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 IGKV1-39P01597 117 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 MBP02144 154 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 IGKV1D-39P04432 117 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 SAA2P0DJI9 122 aaPredicted RBP6.77□□□□□ -1.33
CHD4-208ENST00000540960 PPIAL4GP0DN37 164 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 IGHV1-8P0DP01 117 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 G6PCP35575 357 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 F2RL1P55085 397 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 GNB2P62879 340 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 SERF2P84101 59 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 WDR25Q64LD2 544 aaPredicted RBP6.77□□□□□ -1.33
CHD4-208ENST00000540960 BTNL3Q6UXE8 466 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 ZCCHC24Q8N2G6 241 aaKnown RBP6.77□□□□□ -1.33
CHD4-208ENST00000540960 ABHD12Q8N2K0 398 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 OR10P1Q8NGE3 313 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 OR4C13Q8NGP0 309 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 OR5B3Q8NH48 314 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 DTD1Q8TEA8 209 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 DDB2Q92466 427 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 LHX4Q969G2 390 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 MARC2Q969Z3 335 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 FLYWCH2Q96CP2 140 aaKnown RBP6.77□□□□□ -1.33
CHD4-208ENST00000540960 CLEC7AQ9BXN2 247 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 PATZ1Q9HBE1 687 aaKnown RBP6.77□□□□□ -1.33
CHD4-208ENST00000540960 C19orf12Q9NSK7 152 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 SLC35D1Q9NTN3 355 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
CHD4-208ENST00000540960 LCE6AA0A183 80 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 ZNF705EA8MWA4 302 aaPredicted RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 LEUTXA8MZ59 168 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 C17orf112F2Z3M2 114 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 ENSAO43768 121 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 RAMP3O60896 148 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 MPDU1O75352 247 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 HBE1P02100 147 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 PRH1P02810 166 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 SPP1P10451 314 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 COL8A2P25067 703 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 SUB1P53999 127 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHD4-208ENST00000540960 HSPE1P61604 102 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 RPL30P62888 115 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 RAB31Q13636 194 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 VMA21Q3ZAQ7 101 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 PXDC1Q5TGL8 231 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 RPL7L1Q6DKI1 246 aaKnown RBP6.76□□□□□ -1.33
CHD4-208ENST00000540960 CCDC144NLQ6NUI1 221 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 TGIF2LXQ8IUE1 241 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 LILRB2Q8N423 598 aa6.76□□□□□ -1.33
CHD4-208ENST00000540960 ZNF709Q8N972 641 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms