RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 IL34Q6ZMJ4 242 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-204ENST00000540846 MARC2Q969Z3 335 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 NABP2Q9BQ15 211 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 AIFM2Q9BRQ8 373 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 PCGF1Q9BSM1 259 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 PARD6GQ9BYG4 376 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-204ENST00000540846 ONECUT1Q9UBC0 465 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 KPTNQ9Y664 436 aa10.09□□□□□ -0.79
SMAD3-204ENST00000540846 hCG_1809904A0A1W2PP81 198 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 A0A1W2PPE2 198 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 A0A1W2PR64 198 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 A0A1W2PRV1 198 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 PMS2P5A8MQ11 134 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 TRIM77I1YAP6 450 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 IFNA5P01569 189 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 IFNA17P01571 189 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 VDAC2P45880 294 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-204ENST00000540846 DVL1P1P54792 670 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-204ENST00000540846 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 SLC38A11Q08AI6 406 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 HLA-DRB5Q30154 266 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 TMEM177Q53S58 311 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 UQCC3Q6UW78 93 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 BTNL8Q6UX41 500 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 Q6ZRG5 221 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 PDPNQ86YL7 162 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 LILRB2Q8N423 598 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 LINC01356Q8N9X3 169 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 LYPD6BQ8NI32 183 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 TBX15Q96SF7 602 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 CLEC7AQ9BXN2 247 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 NUP50Q9UKX7 468 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 TLN2Q9Y4G6 2542 aa10.08□□□□□ -0.8
SMAD3-204ENST00000540846 UMAD1C9J7I0 102 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 KRBOX1C9JBD0 128 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 OR8U8P0C7N1 319 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 PRTN3P24158 256 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 REG1BP48304 166 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 RAB13P51153 203 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 F2RL1P55085 397 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 PRB3Q04118 309 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-204ENST00000540846 SPINK9Q5DT21 86 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 TMEM182Q6ZP80 229 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-204ENST00000540846 TGIF2LXQ8IUE1 241 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 PUSL1Q8N0Z8 303 aaKnown RBP10.07□□□□□ -0.8
SMAD3-204ENST00000540846 OR2G3Q8NGZ4 309 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 PRNDQ9UKY0 176 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 SVEP1Q4LDE5 3571 aa10.07□□□□□ -0.8
SMAD3-204ENST00000540846 CSPG4Q6UVK1 2322 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 TRAV20A0A0B4J274 112 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 C15orf62A8K5M9 175 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 H7C2Y5 167 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 UPK2O00526 184 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 SAA1P0DJI8 122 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-204ENST00000540846 PRRX1P54821 245 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 RUNX1Q01196 453 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 PJVKQ0ZLH3 352 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 DIAPH2-AS1Q14236 149 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 ATP6V1FQ16864 119 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 LRRC75BQ2VPJ9 315 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 OR8G2PQ6IF36 304 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 PINX1Q96BK5 328 aaKnown RBP10.06□□□□□ -0.8
SMAD3-204ENST00000540846 LINC00052Q96N35 136 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 CLCC1Q96S66 551 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 PSMG3Q9BT73 122 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-204ENST00000540846 TMEM147Q9BVK8 224 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 SIRT7Q9NRC8 400 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 WASHC3Q9Y3C0 194 aa10.06□□□□□ -0.8
SMAD3-204ENST00000540846 SRRM4A7MD48 611 aaKnown RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 SHOXO15266 292 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 PRH1P02810 166 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HOXB4P17483 251 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 MC5RP33032 325 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 CAMLGP49069 296 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HSPE1P61604 102 aaKnown RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 KLRD1Q13241 179 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 VWC2Q2TAL6 325 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 SLC25A24Q6NUK1 477 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 SCGB1C1Q8TD33 95 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HARBI1Q96MB7 349 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 WDR61Q9GZS3 305 aaKnown RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HRH4Q9H3N8 390 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HIF1ANQ9NWT6 349 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 AMMECR1Q9Y4X0 333 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 RFNGQ9Y644 331 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HIVEP1P15822 2718 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 RNASEK-C17orf49H0YIS7 233 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 AVPP01185 164 aa10.05□□□□□ -0.8
SMAD3-204ENST00000540846 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 RPP30P78346 268 aaKnown RBP10.05□□□□□ -0.8
SMAD3-204ENST00000540846 LDLRAD2Q5SZI1 272 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms