RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 RCVRNP35243 200 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 RPEL1Q2QD12 228 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 C15orf32Q32M92 178 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 FAM209BQ5JX69 171 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 CTRB2Q6GPI1 263 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 C19orf35Q6ZS72 473 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 CMTM1Q8IZ96 169 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 COMMD9Q9P000 198 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 FBXL7Q9UJT9 491 aa16.11■□□□□ 0.17
PTMS-205ENST00000540828 FAM25AB3EWG3 89 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 FAM25CB3EWG5 89 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 FAM25GB3EWG6 89 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 GPR31O00270 319 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 RLN1P04808 185 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 CSN3P07498 182 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 HAPLN4Q86UW8 402 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 DGCR14Q96DF8 476 aaKnown RBP16.1■□□□□ 0.17
PTMS-205ENST00000540828 RSRP1Q9BUV0 290 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 TMEM140Q9NV12 185 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 SIGLEC8Q9NYZ4 499 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 DMRT1Q9Y5R6 373 aa16.1■□□□□ 0.17
PTMS-205ENST00000540828 TPPPO94811 219 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 NDUFB8O95169 186 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 DHFRP00374 187 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 LPAR6P43657 344 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 TSPAN5P62079 268 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 ZNF585BQ52M93 769 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 LPCAT3Q6P1A2 487 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 GPR141Q7Z602 305 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 CADM3Q8N126 398 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 DMBX1Q8NFW5 382 aa16.09■□□□□ 0.17
PTMS-205ENST00000540828 HIST1H1BP16401 226 aaKnown RBP16.08■□□□□ 0.16
PTMS-205ENST00000540828 FCAMRQ8WWV6 532 aa16.08■□□□□ 0.16
PTMS-205ENST00000540828 ASCL2Q99929 193 aa16.08■□□□□ 0.16
PTMS-205ENST00000540828 SRSF8Q9BRL6 282 aaKnown RBP16.08■□□□□ 0.16
PTMS-205ENST00000540828 COMMD5Q9GZQ3 224 aa16.08■□□□□ 0.16
PTMS-205ENST00000540828 IGLC7A0M8Q6 106 aa16.07■□□□□ 0.16
PTMS-205ENST00000540828 RPA2P15927 270 aa16.07■□□□□ 0.16
PTMS-205ENST00000540828 MECP2P51608 486 aaKnown RBP16.07■□□□□ 0.16
PTMS-205ENST00000540828 UCP3P55916 312 aa16.07■□□□□ 0.16
PTMS-205ENST00000540828 ERVK-16P61578 105 aa16.07■□□□□ 0.16
PTMS-205ENST00000540828 Q8N1Y9 231 aa16.07■□□□□ 0.16
PTMS-205ENST00000540828 EXTL2Q9UBQ6 330 aa16.07■□□□□ 0.16
PTMS-205ENST00000540828 IGLV11-55A0A075B6I3 123 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 MARCH11A6NNE9 402 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 H0Y980 276 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 REG1AP05451 166 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 PHLDA2Q53GA4 152 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 FAM212BQ9NTI7 297 aaPredicted RBP16.06■□□□□ 0.16
PTMS-205ENST00000540828 PEMTQ9UBM1 199 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 KLK11Q9UBX7 282 aa16.06■□□□□ 0.16
PTMS-205ENST00000540828 TEX50A0A1B0GTY4 177 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 PPP5D1E7EU14 171 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 GGCTO75223 188 aaKnown RBP16.05■□□□□ 0.16
PTMS-205ENST00000540828 KRASP01116 189 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 DEFA4P12838 97 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 S100GP29377 79 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 THOC7Q6I9Y2 204 aaKnown RBP16.05■□□□□ 0.16
PTMS-205ENST00000540828 OR52I2Q8NH67 350 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 ABHD1Q96SE0 405 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 QTRT1Q9BXR0 403 aaKnown RBP16.05■□□□□ 0.16
PTMS-205ENST00000540828 MIXL1Q9H2W2 232 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 U3KQK5 164 aa16.05■□□□□ 0.16
PTMS-205ENST00000540828 M0QYG6 137 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 OR2C1O95371 312 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 TRAPPC2P0DI81 140 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 TRAPPC2BP0DI82 140 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 G6PCP35575 357 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 SPCS2Q15005 226 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 SLC38A6Q8IZM9 456 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 OR10W1Q8NGF6 305 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 OR1L8Q8NGR8 309 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 C15orf40Q8WUR7 153 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 EEF1AKMT3Q96AZ1 226 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 CCDC140Q96MF4 163 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 WWC2-AS2Q96NR7 200 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 MTFP1Q9UDX5 166 aa16.04■□□□□ 0.16
PTMS-205ENST00000540828 IGHV3-23P01764 117 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 HLA-AP01891 365 aaKnown RBP16.03■□□□□ 0.16
PTMS-205ENST00000540828 FRMD6-AS1P0C7T7 363 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 RNASE12Q5GAN4 147 aaKnown RBP16.03■□□□□ 0.16
PTMS-205ENST00000540828 CLEC19AQ6UXS0 136 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 ADAMTSL5Q6ZMM2 481 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 HSD17B13Q7Z5P4 300 aaPredicted RBP16.03■□□□□ 0.16
PTMS-205ENST00000540828 TBC1D26Q86UD7 250 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 GPHB5Q86YW7 130 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 SBSPONQ8IVN8 264 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 NDUFA4L2Q9NRX3 87 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 S4R3C0 116 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 TENM3Q9P273 2699 aa16.03■□□□□ 0.16
PTMS-205ENST00000540828 LGALS9O00182 355 aa16.02■□□□□ 0.16
PTMS-205ENST00000540828 CTDSP2O14595 271 aa16.02■□□□□ 0.16
PTMS-205ENST00000540828 SNAPC5O75971 98 aa16.02■□□□□ 0.16
PTMS-205ENST00000540828 IFNA6P05013 189 aa16.02■□□□□ 0.16
PTMS-205ENST00000540828 PTBP1P26599 531 aaKnown RBP eCLIP16.02■□□□□ 0.161e-7■■□□□ 12.1
PTMS-205ENST00000540828 ARL3P36405 182 aa16.02■□□□□ 0.16
PTMS-205ENST00000540828 RNASE10Q5GAN6 216 aaKnown RBP16.02■□□□□ 0.16
PTMS-205ENST00000540828 LHFPL1Q86WI0 220 aa16.02■□□□□ 0.16
PTMS-205ENST00000540828 CLVS1Q8IUQ0 354 aaPredicted RBP16.02■□□□□ 0.16
PTMS-205ENST00000540828 Q8N402 240 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms